RNA id: TU858254



Basic Information


Item Value
RNA id TU858254
length 357
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G755600
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84300644 ~ 84301000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


catattactaccatcacactaccctaGTAACACTACGATATCACTACCATCACAATACCCTAGTAACACTACCATAtcactaccatcacactaccctagtaacactaccatcacactaccctagtaacactactatatcactaccatcacaataccctagtaacactactatattactcccatcacactaccctagtaacactactatattactaccatcacaataccctagtaacactaccatattactaccatcacaataccctagtaacactactatattactaccatcacaataccctagtaacactaccatattactaccatcacaataccctagtaacactaccatattac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU858253 lncRNA upstream 411 84297824 ~ 84300233 (+) True G755599
TU858249 lncRNA upstream 6584 84293834 ~ 84294060 (+) True G755595
TU858247 lncRNA upstream 8251 84292114 ~ 84292393 (+) True G755593
TU858244 lncRNA upstream 23367 84277058 ~ 84277277 (+) True G755590
TU858229 lncRNA upstream 49057 84250052 ~ 84251587 (+) True G755577
TU858280 lncRNA downstream 38893 84339893 ~ 84340152 (+) True G755624
TU858285 lncRNA downstream 46619 84347619 ~ 84347903 (+) True G755628
TU858288 lncRNA downstream 49684 84350684 ~ 84351063 (+) True G755631
TU858289 lncRNA downstream 51319 84352319 ~ 84352598 (+) True G755632
TU858704 lncRNA downstream 73448 84374448 ~ 84376357 (+) True G755995
XM_021614101.2 mRNA upstream 347911 83950870 ~ 83952733 (+) True tceanc2
XM_021614096.2 mRNA upstream 381737 83913983 ~ 83918907 (+) False lrrc42
XM_021614095.2 mRNA upstream 381737 83913996 ~ 83918907 (+) True lrrc42
XM_021614093.2 mRNA upstream 397363 83895686 ~ 83903281 (+) False LOC110530814
XM_036986572.1 mRNA downstream 135488 84436488 ~ 84931644 (+) False LOC110492646
XM_036986574.1 mRNA downstream 135488 84436488 ~ 84931644 (+) False LOC110492646
XM_036986575.1 mRNA downstream 135488 84436488 ~ 84931644 (+) False LOC110492646
XM_036986576.1 mRNA downstream 135488 84436488 ~ 84931644 (+) False LOC110492646
XM_036986577.1 mRNA downstream 135488 84436488 ~ 84931644 (+) False LOC110492646
TU858237 other upstream 37678 84261987 ~ 84262966 (+) True G755585
TU858056 other upstream 329947 83969378 ~ 83970697 (+) True G755428
TU857978 other upstream 395032 83903635 ~ 83905612 (+) True LOC110530814
TU857984 other upstream 411007 83886814 ~ 83889637 (+) True G755363
TU857995 other upstream 513703 83785960 ~ 83786941 (+) True LOC110529145
TU858258 other downstream 2470 84303470 ~ 84308274 (+) True G755602
TU858875 other downstream 257786 84558786 ~ 84561891 (+) True G756134
TU859041 other downstream 575994 84876994 ~ 84878079 (+) True G756271
TU859074 other downstream 635066 84936066 ~ 84937744 (+) False G756298
TU859075 other downstream 635066 84936066 ~ 84937147 (+) False G756298

Expression Profile