RNA id: TU858280



Basic Information


Item Value
RNA id TU858280
length 260
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G755624
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84339893 ~ 84340152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cattcaacccctcccatctatctctcaacaccatccagtcccacccttcagctccactcaacccctcccatctatctctcaacatcatccagtcccaccctccagctccactcaacccctcccatctatctctcaacaccatccagtcccacccttcagctccattcaacccctcccatctatctctcaacaccatccagtcccacccttcagctccactcaacccctcccatctatctctcaacaccatccagtcccac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU858254 lncRNA upstream 38893 84300644 ~ 84301000 (+) True G755600
TU858253 lncRNA upstream 39660 84297824 ~ 84300233 (+) True G755599
TU858249 lncRNA upstream 45833 84293834 ~ 84294060 (+) True G755595
TU858247 lncRNA upstream 47500 84292114 ~ 84292393 (+) True G755593
TU858244 lncRNA upstream 62616 84277058 ~ 84277277 (+) True G755590
TU858285 lncRNA downstream 7467 84347619 ~ 84347903 (+) True G755628
TU858288 lncRNA downstream 10532 84350684 ~ 84351063 (+) True G755631
TU858289 lncRNA downstream 12167 84352319 ~ 84352598 (+) True G755632
TU858704 lncRNA downstream 34296 84374448 ~ 84376357 (+) True G755995
TU858727 lncRNA downstream 49044 84389196 ~ 84390181 (+) True G756017
XM_021614101.2 mRNA upstream 387160 83950870 ~ 83952733 (+) True tceanc2
XM_021614096.2 mRNA upstream 420986 83913983 ~ 83918907 (+) False lrrc42
XM_021614095.2 mRNA upstream 420986 83913996 ~ 83918907 (+) True lrrc42
XM_021614093.2 mRNA upstream 436612 83895686 ~ 83903281 (+) False LOC110530814
XM_036986572.1 mRNA downstream 96336 84436488 ~ 84931644 (+) False LOC110492646
XM_036986574.1 mRNA downstream 96336 84436488 ~ 84931644 (+) False LOC110492646
XM_036986575.1 mRNA downstream 96336 84436488 ~ 84931644 (+) False LOC110492646
XM_036986576.1 mRNA downstream 96336 84436488 ~ 84931644 (+) False LOC110492646
XM_036986577.1 mRNA downstream 96336 84436488 ~ 84931644 (+) False LOC110492646
TU858258 other upstream 31619 84303470 ~ 84308274 (+) True G755602
TU858237 other upstream 76927 84261987 ~ 84262966 (+) True G755585
TU858056 other upstream 369196 83969378 ~ 83970697 (+) True G755428
TU857978 other upstream 434281 83903635 ~ 83905612 (+) True LOC110530814
TU857984 other upstream 450256 83886814 ~ 83889637 (+) True G755363
TU858875 other downstream 218634 84558786 ~ 84561891 (+) True G756134
TU859041 other downstream 536842 84876994 ~ 84878079 (+) True G756271
TU859074 other downstream 595914 84936066 ~ 84937744 (+) False G756298
TU859075 other downstream 595914 84936066 ~ 84937147 (+) False G756298
TU859221 other downstream 916630 85256782 ~ 85264093 (+) True LOC118965572

Expression Profile