RNA id: TU858704



Basic Information


Item Value
RNA id TU858704
length 288
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G755995
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84374448 ~ 84376357 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCGCCACATGGCCtgaaactgcaccattttgtttctctccataGCCCACgcactttcaacatttagatcataaataattacatttttcattgtgttaatgatggcggattgattgatttccaagtttgttttttcaagatgagtgatgaAAAGAGAATCATCCAACCCACCgggtatctcactacacccccatatgccatgtcttgaaatatgcagacagacggattaaaagcacgtttacattgaaatACTTCTGACGGACAACTTTCTAGCTCCGCCCACAACTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU858289 lncRNA upstream 21850 84352319 ~ 84352598 (+) True G755632
TU858288 lncRNA upstream 23385 84350684 ~ 84351063 (+) True G755631
TU858285 lncRNA upstream 26545 84347619 ~ 84347903 (+) True G755628
TU858280 lncRNA upstream 34296 84339893 ~ 84340152 (+) True G755624
TU858254 lncRNA upstream 73448 84300644 ~ 84301000 (+) True G755600
TU858727 lncRNA downstream 12839 84389196 ~ 84390181 (+) True G756017
TU858791 lncRNA downstream 72827 84449184 ~ 84450948 (+) True G756072
TU858801 lncRNA downstream 94952 84471309 ~ 84475065 (+) True G756082
TU858800 lncRNA downstream 95877 84472234 ~ 84472885 (+) True G756081
TU858862 lncRNA downstream 167312 84543669 ~ 84543962 (+) True G756126
XM_021614101.2 mRNA upstream 421715 83950870 ~ 83952733 (+) True tceanc2
XM_021614096.2 mRNA upstream 455541 83913983 ~ 83918907 (+) False lrrc42
XM_021614095.2 mRNA upstream 455541 83913996 ~ 83918907 (+) True lrrc42
XM_021614093.2 mRNA upstream 471167 83895686 ~ 83903281 (+) False LOC110530814
XM_036986572.1 mRNA downstream 60131 84436488 ~ 84931644 (+) False LOC110492646
XM_036986574.1 mRNA downstream 60131 84436488 ~ 84931644 (+) False LOC110492646
XM_036986575.1 mRNA downstream 60131 84436488 ~ 84931644 (+) False LOC110492646
XM_036986576.1 mRNA downstream 60131 84436488 ~ 84931644 (+) False LOC110492646
XM_036986577.1 mRNA downstream 60131 84436488 ~ 84931644 (+) False LOC110492646
TU858258 other upstream 66174 84303470 ~ 84308274 (+) True G755602
TU858237 other upstream 111482 84261987 ~ 84262966 (+) True G755585
TU858056 other upstream 403751 83969378 ~ 83970697 (+) True G755428
TU857978 other upstream 468836 83903635 ~ 83905612 (+) True LOC110530814
TU857984 other upstream 484811 83886814 ~ 83889637 (+) True G755363
TU858875 other downstream 182429 84558786 ~ 84561891 (+) True G756134
TU859041 other downstream 500637 84876994 ~ 84878079 (+) True G756271
TU859074 other downstream 559709 84936066 ~ 84937744 (+) False G756298
TU859075 other downstream 559709 84936066 ~ 84937147 (+) False G756298
TU859221 other downstream 880425 85256782 ~ 85264093 (+) True LOC118965572

Expression Profile