RNA id: TU858955



Basic Information


Item Value
RNA id TU858955
length 223
lncRNA type intronic
GC content 0.38
exon number 2
gene id G756203
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84696603 ~ 84696945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATATAACTTATAACAACTGTTGTTTGATGGGGACAATACGACATGAGCAGTTGATATCTATATTCTATGCAGACTGTTAGTGTTTGATGGGGACAATACGTCCTGACCGGTTGATATCTATATTCTATGCAGACTGTTAGTGTTTGATGCCAGTGACACTGAGTCCTCAGTAATTGACTGTACATTTTCACGCAATTGACATTTTATGACGCCAGTCTTTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU858952 lncRNA upstream 6723 84688565 ~ 84689880 (+) True G756200
TU858950 lncRNA upstream 8113 84685841 ~ 84688490 (+) True G756198
TU858932 lncRNA upstream 23311 84672429 ~ 84673292 (+) True G756182
TU858931 lncRNA upstream 25222 84670917 ~ 84671381 (+) True G756181
TU858923 lncRNA upstream 42374 84653551 ~ 84654229 (+) True G756173
TU858956 lncRNA downstream 486 84697431 ~ 84698455 (+) True G756204
TU858978 lncRNA downstream 42168 84739113 ~ 84739527 (+) True G756223
TU858980 lncRNA downstream 45189 84742134 ~ 84742851 (+) True G756225
TU858982 lncRNA downstream 50010 84746955 ~ 84747997 (+) True G756227
TU858983 lncRNA downstream 51267 84748212 ~ 84749614 (+) True G756228
XM_021614101.2 mRNA upstream 743870 83950870 ~ 83952733 (+) True tceanc2
XM_021614096.2 mRNA upstream 777696 83913983 ~ 83918907 (+) False lrrc42
XM_021614095.2 mRNA upstream 777696 83913996 ~ 83918907 (+) True lrrc42
XM_021614093.2 mRNA upstream 793322 83895686 ~ 83903281 (+) False LOC110530814
XR_005052977.1 mRNA downstream 104328 84801273 ~ 84804572 (+) True LOC118965568
XR_005052978.1 mRNA downstream 246029 84942974 ~ 84964998 (+) True LOC118965569
XM_036986892.1 mRNA downstream 269281 84966226 ~ 84970196 (+) True LOC110531029
XM_021614102.2 mRNA downstream 276652 84973597 ~ 84978102 (+) False capsla
XM_036986588.1 mRNA downstream 276762 84973707 ~ 84978102 (+) False capsla
TU858875 other upstream 134712 84558786 ~ 84561891 (+) True G756134
TU858258 other upstream 388329 84303470 ~ 84308274 (+) True G755602
TU858237 other upstream 433637 84261987 ~ 84262966 (+) True G755585
TU858056 other upstream 725906 83969378 ~ 83970697 (+) True G755428
TU857978 other upstream 790991 83903635 ~ 83905612 (+) True LOC110530814
TU859041 other downstream 180049 84876994 ~ 84878079 (+) True G756271
TU859074 other downstream 239121 84936066 ~ 84937744 (+) False G756298
TU859075 other downstream 239121 84936066 ~ 84937147 (+) False G756298
TU859221 other downstream 559837 85256782 ~ 85264093 (+) True LOC118965572
TU860498 other downstream 1255023 85951968 ~ 86028274 (+) True G757472

Expression Profile