RNA id: TU859073


Basic Information

Item Value
RNA id TU859073
length 309
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G756297
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84935178 ~ 84935486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGCAGAATGAGAACAACAGGTAGCAGAATGAGAACAACAGGTAGCAGAATGAGAACAACAGGTAGCAGAATGAGAACAACAGTTAGCATGAGAACAACATGTAGTAGAATGAGACCAACAGGAAGCAGAATGAGAACAACAGGAAGCAGAATGAGAACAACAGGAAGCAGAATGAGAACAACAGGAAGCAGAATGAGAACAACAGGTAGCAGACTGAGAACAACAGGAAGCAGAATGAGAACAACAGGTAGAAGAATGAGAACAACAGGTAGAAGAATGGGAACAACAGGAAGCAGAATGAGAACAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU859072 lncRNA upstream 562 84934278 ~ 84934616 (+) True G756296
TU859071 lncRNA upstream 9195 84925630 ~ 84925983 (+) True G756295
TU859062 lncRNA upstream 22021 84911657 ~ 84913157 (+) True G756287
TU859059 lncRNA upstream 25271 84909592 ~ 84909907 (+) True G756286
TU859045 lncRNA upstream 50212 84884579 ~ 84884966 (+) True G756273
TU859076 lncRNA downstream 1307 84936793 ~ 84937744 (+) True G756298
TU859077 lncRNA downstream 2346 84937832 ~ 84938108 (+) True G756299
TU859078 lncRNA downstream 2719 84938205 ~ 84938484 (+) True G756300
TU859079 lncRNA downstream 3015 84938501 ~ 84938795 (+) True G756301
TU859083 lncRNA downstream 13833 84949319 ~ 84949540 (+) True G756305
XM_036986582.1 mRNA upstream 3534 84436489 ~ 84931644 (+) False LOC110492646
XR_005052978.1 mRNA downstream 7488 84942974 ~ 84964998 (+) True LOC118965569
XM_036986892.1 mRNA downstream 30740 84966226 ~ 84970196 (+) True LOC110531029
XM_021614102.2 mRNA downstream 38111 84973597 ~ 84978102 (+) False capsla
XM_036986588.1 mRNA downstream 38221 84973707 ~ 84978102 (+) False capsla
XM_036986587.1 mRNA downstream 38668 84974154 ~ 84978102 (+) True capsla
TU859041 other upstream 57099 84876994 ~ 84878079 (+) True G756271
TU858875 other upstream 373287 84558786 ~ 84561891 (+) True G756134
TU858258 other upstream 626904 84303470 ~ 84308274 (+) True G755602
TU858237 other upstream 672212 84261987 ~ 84262966 (+) True G755585
TU858056 other upstream 964481 83969378 ~ 83970697 (+) True G755428
TU859074 other downstream 580 84936066 ~ 84937744 (+) False G756298
TU859075 other downstream 580 84936066 ~ 84937147 (+) False G756298
TU859221 other downstream 321296 85256782 ~ 85264093 (+) True LOC118965572
TU860498 other downstream 1016482 85951968 ~ 86028274 (+) True G757472
TU860712 other downstream 1182177 86117663 ~ 86117948 (+) True G757663

Expression Profile