RNA id: TU859078


Basic Information

Item Value
RNA id TU859078
length 280
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G756300
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84938205 ~ 84938484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TTGGTTTAAACACCTTGTACATGAGAATATACAGTTTAGGAGCTGGAGAGACATTTGCAACAAGATGTTTGTCTTGAGTTTCACACCTATGATCCAAGAGTGACTGATTGTTCCTGTAATATAAATAAGAGTTCTTATTGTCCTGTGATTAAAATCAGATGTAATTTGTCACTTGGTTCGTaatcaacaggtgtagactaacagtgaaatgcttatgtcaCGACCCCCCGCCCGAAGTTGACTCCCCCGCCTGTTCAGGCGGAGCTctgcggtcgtcgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU859077 lncRNA upstream 97 84937832 ~ 84938108 (+) True G756299
TU859076 lncRNA upstream 461 84936793 ~ 84937744 (+) True G756298
TU859073 lncRNA upstream 2719 84935178 ~ 84935486 (+) True G756297
TU859072 lncRNA upstream 3589 84934278 ~ 84934616 (+) True G756296
TU859071 lncRNA upstream 12222 84925630 ~ 84925983 (+) True G756295
TU859079 lncRNA downstream 17 84938501 ~ 84938795 (+) True G756301
TU859083 lncRNA downstream 10835 84949319 ~ 84949540 (+) True G756305
TU859093 lncRNA downstream 23063 84961547 ~ 84963467 (+) False G756314
TU859094 lncRNA downstream 23063 84961547 ~ 84963467 (+) False G756314
TU859095 lncRNA downstream 23453 84961937 ~ 84963467 (+) True G756314
XM_036986582.1 mRNA upstream 6561 84436489 ~ 84931644 (+) False LOC110492646
XR_005052978.1 mRNA downstream 4490 84942974 ~ 84964998 (+) True LOC118965569
XM_036986892.1 mRNA downstream 27742 84966226 ~ 84970196 (+) True LOC110531029
XM_021614102.2 mRNA downstream 35113 84973597 ~ 84978102 (+) False capsla
XM_036986588.1 mRNA downstream 35223 84973707 ~ 84978102 (+) False capsla
XM_036986587.1 mRNA downstream 35670 84974154 ~ 84978102 (+) True capsla
TU859074 other upstream 461 84936066 ~ 84937744 (+) False G756298
TU859075 other upstream 1058 84936066 ~ 84937147 (+) False G756298
TU859041 other upstream 60126 84876994 ~ 84878079 (+) True G756271
TU858875 other upstream 376314 84558786 ~ 84561891 (+) True G756134
TU858258 other upstream 629931 84303470 ~ 84308274 (+) True G755602
TU859221 other downstream 318298 85256782 ~ 85264093 (+) True LOC118965572
TU860498 other downstream 1013484 85951968 ~ 86028274 (+) True G757472
TU860712 other downstream 1179179 86117663 ~ 86117948 (+) True G757663
TU860829 other downstream 1291867 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 1592669 86531153 ~ 86532379 (+) True G757902

Expression Profile