RNA id: TU859079



Basic Information


Item Value
RNA id TU859079
length 295
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G756301
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84938501 ~ 84938795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctaccgatccctttttcttttcGGTTAGTTTTGTCTCATTAGTTACACCTGttcctattttgtgtgtgtgtgatgttcttCCCTATTTTAGCGTATGGAACCCGCCcctttgttgtgcgggattattttgaTGTTCACGTTGTATTCGTTGGTGTTGTTCGTTGCTCTGGACCTTGTTACccgttgttttgggttggtcagtgttttgcgCCCTGCGTGTTTGGGCATTTCATTTTGGTGCCACATTAAAGTGCACTTTTCCCCTggacctctctgctctctgcgcctgattcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU859078 lncRNA upstream 17 84938205 ~ 84938484 (+) True G756300
TU859077 lncRNA upstream 393 84937832 ~ 84938108 (+) True G756299
TU859076 lncRNA upstream 757 84936793 ~ 84937744 (+) True G756298
TU859073 lncRNA upstream 3015 84935178 ~ 84935486 (+) True G756297
TU859072 lncRNA upstream 3885 84934278 ~ 84934616 (+) True G756296
TU859083 lncRNA downstream 10524 84949319 ~ 84949540 (+) True G756305
TU859093 lncRNA downstream 22752 84961547 ~ 84963467 (+) False G756314
TU859094 lncRNA downstream 22752 84961547 ~ 84963467 (+) False G756314
TU859095 lncRNA downstream 23142 84961937 ~ 84963467 (+) True G756314
TU859110 lncRNA downstream 65921 85004716 ~ 85004916 (+) True G756329
XM_036986582.1 mRNA upstream 6857 84436489 ~ 84931644 (+) False LOC110492646
XR_005052978.1 mRNA downstream 4179 84942974 ~ 84964998 (+) True LOC118965569
XM_036986892.1 mRNA downstream 27431 84966226 ~ 84970196 (+) True LOC110531029
XM_021614102.2 mRNA downstream 34802 84973597 ~ 84978102 (+) False capsla
XM_036986588.1 mRNA downstream 34912 84973707 ~ 84978102 (+) False capsla
XM_036986587.1 mRNA downstream 35359 84974154 ~ 84978102 (+) True capsla
TU859074 other upstream 757 84936066 ~ 84937744 (+) False G756298
TU859075 other upstream 1354 84936066 ~ 84937147 (+) False G756298
TU859041 other upstream 60422 84876994 ~ 84878079 (+) True G756271
TU858875 other upstream 376610 84558786 ~ 84561891 (+) True G756134
TU858258 other upstream 630227 84303470 ~ 84308274 (+) True G755602
TU859221 other downstream 317987 85256782 ~ 85264093 (+) True LOC118965572
TU860498 other downstream 1013173 85951968 ~ 86028274 (+) True G757472
TU860712 other downstream 1178868 86117663 ~ 86117948 (+) True G757663
TU860829 other downstream 1291556 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 1592358 86531153 ~ 86532379 (+) True G757902

Expression Profile