RNA id: TU860373


Basic Information

Item Value
RNA id TU860373
length 216
lncRNA type intronic
GC content 0.48
exon number 2
gene id G757358
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 85804483 ~ 85805327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

agccagccagccacatgtCTTGGGGATAGTGTTGATATGACTATAGtcagaccagccagccacacatcTTGGGGATACTGTTGATATGACTATAGTCAGACCAGCCAGCAACACATCTTGTGGATAGTGTTGATATGACTATAGTCAGACCAGCCAGCCACACGTCTTGTGGATAGTGTTGATATGACTATAGTCAGACCAGTCAGACCAGCCAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU860369 lncRNA upstream 4130 85799896 ~ 85800353 (+) True G757354
TU860241 lncRNA upstream 121894 85682344 ~ 85682589 (+) True G757243
TU860233 lncRNA upstream 140343 85663104 ~ 85664140 (+) True G757235
TU860230 lncRNA upstream 151929 85652177 ~ 85652554 (+) True G757232
TU860199 lncRNA upstream 156643 85647608 ~ 85647840 (+) True G757226
TU860394 lncRNA downstream 57852 85863179 ~ 85863889 (+) True G757378
TU860360 lncRNA downstream 76372 85881699 ~ 85882385 (+) True G757346
TU860359 lncRNA downstream 77224 85882551 ~ 85883276 (+) True G757345
TU860456 lncRNA downstream 89662 85894989 ~ 85895206 (+) True G757439
TU860471 lncRNA downstream 101661 85906988 ~ 85908033 (+) True G757449
XM_021614109.2 mRNA upstream 43525 85739005 ~ 85760958 (+) True LOC110530826
XM_036986893.1 mRNA upstream 91277 85709654 ~ 85713206 (+) True LOC118965641
XM_021614110.2 mRNA upstream 95713 85690520 ~ 85708770 (+) True LOC110530827
XM_021614113.2 mRNA upstream 141426 85658600 ~ 85663057 (+) True LOC110530829
LOC110530830 mRNA upstream 186156 85617604 ~ 85618327 (+) True LOC110530830
XM_036986621.1 mRNA downstream 546947 86352274 ~ 86555806 (+) True LOC110530844
XM_036986626.1 mRNA downstream 764373 86569700 ~ 86583738 (+) True LOC110504868
XM_036986627.1 mRNA downstream 786183 86591510 ~ 86627902 (+) False LOC110530851
XM_036986641.1 mRNA downstream 1106850 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 1197852 87003179 ~ 87406445 (+) True LOC110530822
TU859221 other upstream 540390 85256782 ~ 85264093 (+) True LOC118965572
TU859074 other upstream 866739 84936066 ~ 84937744 (+) False G756298
TU859075 other upstream 867336 84936066 ~ 84937147 (+) False G756298
TU859041 other upstream 926404 84876994 ~ 84878079 (+) True G756271
TU858875 other upstream 1242592 84558786 ~ 84561891 (+) True G756134
TU860498 other downstream 146641 85951968 ~ 86028274 (+) True G757472
TU860712 other downstream 312336 86117663 ~ 86117948 (+) True G757663
TU860829 other downstream 425024 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 725826 86531153 ~ 86532379 (+) True G757902
TU861161 other downstream 829457 86634784 ~ 86635460 (+) True G758045

Expression Profile