RNA id: TU860725


Basic Information

Item Value
RNA id TU860725
length 305
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G757671
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 86129660 ~ 86129964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtatatatactccctctggtaccaatccccactctatcactgtatatatactccctctggtaccaatccccactctatcactgtatatatactccctctggtaccaatccccactctatcactgtatatatactccctctggtaccaatccccactctatcactgtatatatactccctCTGGTACCAATCCCcactcactgtatatatgctCCCTCTGGTaccaatccccactctatcactgtatatatactccctctggtaccaatccccactctatcactgtatatatactccctctggtac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU860722 lncRNA upstream 4446 86124275 ~ 86125214 (+) True G757668
TU860574 lncRNA upstream 46736 86077369 ~ 86082924 (+) True G757538
TU860575 lncRNA upstream 47139 86078946 ~ 86082521 (+) True G757539
TU860499 lncRNA upstream 168407 85957852 ~ 85961253 (+) False G757473
TU860502 lncRNA upstream 168407 85957852 ~ 85961253 (+) False G757473
TU860731 lncRNA downstream 1822 86131786 ~ 86132111 (+) True G757677
TU860732 lncRNA downstream 2472 86132436 ~ 86132648 (+) True G757678
TU860733 lncRNA downstream 4119 86134083 ~ 86134339 (+) True G757679
TU860741 lncRNA downstream 15777 86145741 ~ 86148880 (+) True G757687
TU860743 lncRNA downstream 23450 86153414 ~ 86153619 (+) True G757689
XM_036986618.1 mRNA upstream 248443 85793000 ~ 85881217 (+) True LOC110531032
XM_021614109.2 mRNA upstream 368702 85739005 ~ 85760958 (+) True LOC110530826
XM_036986893.1 mRNA upstream 416454 85709654 ~ 85713206 (+) True LOC118965641
XM_021614110.2 mRNA upstream 420890 85690520 ~ 85708770 (+) True LOC110530827
XM_021614113.2 mRNA upstream 466603 85658600 ~ 85663057 (+) True LOC110530829
XM_036986621.1 mRNA downstream 222310 86352274 ~ 86555806 (+) True LOC110530844
XM_036986626.1 mRNA downstream 439736 86569700 ~ 86583738 (+) True LOC110504868
XM_036986627.1 mRNA downstream 461546 86591510 ~ 86627902 (+) False LOC110530851
XM_036986641.1 mRNA downstream 782213 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 873215 87003179 ~ 87406445 (+) True LOC110530822
TU860712 other upstream 11712 86117663 ~ 86117948 (+) True G757663
TU860498 other upstream 101386 85951968 ~ 86028274 (+) True G757472
TU859221 other upstream 865567 85256782 ~ 85264093 (+) True LOC118965572
TU859074 other upstream 1191916 84936066 ~ 84937744 (+) False G756298
TU860829 other downstream 100387 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 401189 86531153 ~ 86532379 (+) True G757902
TU861161 other downstream 504820 86634784 ~ 86635460 (+) True G758045
TU861389 other downstream 782212 86912176 ~ 86920509 (+) False ly97.3
TU861390 other downstream 782212 86912176 ~ 86920509 (+) False ly97.3

Expression Profile