RNA id: TU860733



Basic Information


Item Value
RNA id TU860733
length 257
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G757679
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 86134083 ~ 86134339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatgcaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatgcaatgttctacagtgaaagtaatctgctgagcggggtaacaagtacactgtaaacaccaatacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatacaatgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU860732 lncRNA upstream 1435 86132436 ~ 86132648 (+) True G757678
TU860731 lncRNA upstream 1972 86131786 ~ 86132111 (+) True G757677
TU860725 lncRNA upstream 4119 86129660 ~ 86129964 (+) True G757671
TU860722 lncRNA upstream 8869 86124275 ~ 86125214 (+) True G757668
TU860574 lncRNA upstream 51159 86077369 ~ 86082924 (+) True G757538
TU860741 lncRNA downstream 11402 86145741 ~ 86148880 (+) True G757687
TU860743 lncRNA downstream 19075 86153414 ~ 86153619 (+) True G757689
TU860744 lncRNA downstream 22619 86156958 ~ 86157282 (+) True G757690
TU860763 lncRNA downstream 55884 86190223 ~ 86190552 (+) True G757698
TU860821 lncRNA downstream 81883 86216222 ~ 86217126 (+) True G757746
XM_036986618.1 mRNA upstream 252866 85793000 ~ 85881217 (+) True LOC110531032
XM_021614109.2 mRNA upstream 373125 85739005 ~ 85760958 (+) True LOC110530826
XM_036986893.1 mRNA upstream 420877 85709654 ~ 85713206 (+) True LOC118965641
XM_021614110.2 mRNA upstream 425313 85690520 ~ 85708770 (+) True LOC110530827
XM_021614113.2 mRNA upstream 471026 85658600 ~ 85663057 (+) True LOC110530829
XM_036986621.1 mRNA downstream 217935 86352274 ~ 86555806 (+) True LOC110530844
XM_036986626.1 mRNA downstream 435361 86569700 ~ 86583738 (+) True LOC110504868
XM_036986627.1 mRNA downstream 457171 86591510 ~ 86627902 (+) False LOC110530851
XM_036986641.1 mRNA downstream 777838 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 868840 87003179 ~ 87406445 (+) True LOC110530822
TU860712 other upstream 16135 86117663 ~ 86117948 (+) True G757663
TU860498 other upstream 105809 85951968 ~ 86028274 (+) True G757472
TU859221 other upstream 869990 85256782 ~ 85264093 (+) True LOC118965572
TU859074 other upstream 1196339 84936066 ~ 84937744 (+) False G756298
TU860829 other downstream 96012 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 396814 86531153 ~ 86532379 (+) True G757902
TU861161 other downstream 500445 86634784 ~ 86635460 (+) True G758045
TU861389 other downstream 777837 86912176 ~ 86920509 (+) False ly97.3
TU861390 other downstream 777837 86912176 ~ 86920509 (+) False ly97.3

Expression Profile