RNA id: TU860821



Basic Information


Item Value
RNA id TU860821
length 356
lncRNA type inter_gene
GC content 0.36
exon number 3
gene id G757746
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 86216222 ~ 86217126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAGGTTATCTGATGAAGCATGTCAGATATGTAATAGAATGAGGTTATCTGATGAAGCATGTCAGATATGTAATAGAATGAGGTTATCTGATGAAGCATGTCAGATATGTAATAGAATGAGGTGATCTGATGAAGCATGTCAGATATGTAATAGAATGAGGTGATCTGATGAAGCATGTCAGATATGTAATAGACAGAGGTTATCTGTTGAAGCATGTCAGATATGTAATAGACAGAGGTTATCTGATGAAGCATGTCAGATATGTAACATAAAGGGGTTATCTGATGAAGCATGTCAGATATGTTATAGAATGAGGTGATCTGATGAAGCATGTCAGATATGTAATAGACAGAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU860763 lncRNA upstream 25670 86190223 ~ 86190552 (+) True G757698
TU860744 lncRNA upstream 58940 86156958 ~ 86157282 (+) True G757690
TU860743 lncRNA upstream 62603 86153414 ~ 86153619 (+) True G757689
TU860741 lncRNA upstream 67342 86145741 ~ 86148880 (+) True G757687
TU860733 lncRNA upstream 81883 86134083 ~ 86134339 (+) True G757679
TU860827 lncRNA downstream 6086 86223212 ~ 86223537 (+) True G757752
TU860828 lncRNA downstream 7157 86224283 ~ 86224687 (+) True G757753
TU860928 lncRNA downstream 111513 86328639 ~ 86328855 (+) True G757841
TU860929 lncRNA downstream 112676 86329802 ~ 86330062 (+) True G757842
TU860931 lncRNA downstream 114197 86331323 ~ 86331523 (+) True G757844
XM_036986618.1 mRNA upstream 335005 85793000 ~ 85881217 (+) True LOC110531032
XM_021614109.2 mRNA upstream 455264 85739005 ~ 85760958 (+) True LOC110530826
XM_036986893.1 mRNA upstream 503016 85709654 ~ 85713206 (+) True LOC118965641
XM_021614110.2 mRNA upstream 507452 85690520 ~ 85708770 (+) True LOC110530827
XM_021614113.2 mRNA upstream 553165 85658600 ~ 85663057 (+) True LOC110530829
XM_036986621.1 mRNA downstream 135148 86352274 ~ 86555806 (+) True LOC110530844
XM_036986626.1 mRNA downstream 352574 86569700 ~ 86583738 (+) True LOC110504868
XM_036986627.1 mRNA downstream 374384 86591510 ~ 86627902 (+) False LOC110530851
XM_036986641.1 mRNA downstream 695051 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 786053 87003179 ~ 87406445 (+) True LOC110530822
TU860712 other upstream 98274 86117663 ~ 86117948 (+) True G757663
TU860498 other upstream 187948 85951968 ~ 86028274 (+) True G757472
TU859221 other upstream 952129 85256782 ~ 85264093 (+) True LOC118965572
TU859074 other upstream 1278478 84936066 ~ 84937744 (+) False G756298
TU860829 other downstream 13225 86230351 ~ 86231459 (+) True G757754
TU860993 other downstream 314027 86531153 ~ 86532379 (+) True G757902
TU861161 other downstream 417658 86634784 ~ 86635460 (+) True G758045
TU861389 other downstream 695050 86912176 ~ 86920509 (+) False ly97.3
TU861390 other downstream 695050 86912176 ~ 86920509 (+) False ly97.3

Expression Profile