RNA id: TU860931



Basic Information


Item Value
RNA id TU860931
length 201
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G757844
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 86331323 ~ 86331523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccaggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataataatcacagtagttgtcgagggtgcagcaagtcagcacctcaggaataaatgtcagttggcttttcatagccgatcat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU860929 lncRNA upstream 1261 86329802 ~ 86330062 (+) True G757842
TU860928 lncRNA upstream 2468 86328639 ~ 86328855 (+) True G757841
TU860828 lncRNA upstream 106636 86224283 ~ 86224687 (+) True G757753
TU860827 lncRNA upstream 107786 86223212 ~ 86223537 (+) True G757752
TU860821 lncRNA upstream 114197 86216222 ~ 86217126 (+) True G757746
TU860946 lncRNA downstream 35618 86367141 ~ 86367761 (+) True G757859
TU860973 lncRNA downstream 147712 86479235 ~ 86480043 (+) True G757884
TU860998 lncRNA downstream 217508 86549031 ~ 86549480 (+) True G757907
TU861135 lncRNA downstream 245937 86577460 ~ 86577961 (+) True G758022
TU861137 lncRNA downstream 249166 86580689 ~ 86580920 (+) True G758024
XM_036986618.1 mRNA upstream 450106 85793000 ~ 85881217 (+) True LOC110531032
XM_021614109.2 mRNA upstream 570365 85739005 ~ 85760958 (+) True LOC110530826
XM_036986893.1 mRNA upstream 618117 85709654 ~ 85713206 (+) True LOC118965641
XM_021614110.2 mRNA upstream 622553 85690520 ~ 85708770 (+) True LOC110530827
XM_021614113.2 mRNA upstream 668266 85658600 ~ 85663057 (+) True LOC110530829
XM_036986621.1 mRNA downstream 20751 86352274 ~ 86555806 (+) True LOC110530844
XM_036986626.1 mRNA downstream 238177 86569700 ~ 86583738 (+) True LOC110504868
XM_036986627.1 mRNA downstream 259987 86591510 ~ 86627902 (+) False LOC110530851
XM_036986641.1 mRNA downstream 580654 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 671656 87003179 ~ 87406445 (+) True LOC110530822
TU860829 other upstream 99864 86230351 ~ 86231459 (+) True G757754
TU860712 other upstream 213375 86117663 ~ 86117948 (+) True G757663
TU860498 other upstream 303049 85951968 ~ 86028274 (+) True G757472
TU859221 other upstream 1067230 85256782 ~ 85264093 (+) True LOC118965572
TU859075 other upstream 1394176 84936066 ~ 84937147 (+) False G756298
TU860993 other downstream 199630 86531153 ~ 86532379 (+) True G757902
TU861161 other downstream 303261 86634784 ~ 86635460 (+) True G758045
TU861389 other downstream 580653 86912176 ~ 86920509 (+) False ly97.3
TU861390 other downstream 580653 86912176 ~ 86920509 (+) False ly97.3
TU861391 other downstream 580653 86912176 ~ 86920509 (+) True ly97.3

Expression Profile