RNA id: TU861259


Basic Information

Item Value
RNA id TU861259
length 558
lncRNA type antisense_over
GC content 0.49
exon number 2
gene id G758122
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 86826825 ~ 86827726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGCACTGTCGACCATTTCTGGGCTAATTTGCATTTGATAACAAGGGATCCCGTAAGCGGCAGAATAGGCTCAGGAAAGGGtcgcaaagagagagagagagcagagagagagagcagagagagagagcagagagagagcaaatagagagaggagagcagagagagagagcagagagagagcaaatagagagaggagagcagagagagagagcagagagagagagcagagagagagagcagagagagagcaaatagagagaggagagcagagagagagagcagagagagagcaaatagagagaggagagcagagagagagagcagagagagagcaaatagagaggagagcagagagagagagcagagagagagcaaatagagagaggagagcagagagcagagagagagagagcagaaagagagaaaatagagagagagcaaaaggagagagcagagagaagagagagcagagtagagagagagcagagagagagcagagagagcagagagagagcaaaaagagagagcagagagagagaagaaaaagagagagagagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU861255 lncRNA upstream 2312 86817753 ~ 86824513 (+) False G758118
TU861254 lncRNA upstream 2312 86819029 ~ 86824513 (+) True G758118
TU861182 lncRNA upstream 53975 86769661 ~ 86772850 (+) False G758059
TU861188 lncRNA upstream 53975 86771517 ~ 86772850 (+) True G758059
TU861225 lncRNA upstream 62553 86758806 ~ 86764272 (+) False G758090
TU861370 lncRNA downstream 31131 86858857 ~ 86859066 (+) True G758215
TU861378 lncRNA downstream 36451 86864177 ~ 86864404 (+) True G758223
TU861384 lncRNA downstream 42847 86870573 ~ 86871907 (+) True G758229
TU861385 lncRNA downstream 44555 86872281 ~ 86872704 (+) True G758230
TU861387 lncRNA downstream 45197 86872923 ~ 86874716 (+) True G758231
XM_036986627.1 mRNA upstream 198923 86591510 ~ 86627902 (+) False LOC110530851
XM_036986626.1 mRNA upstream 243087 86569700 ~ 86583738 (+) True LOC110504868
XM_036986621.1 mRNA upstream 271019 86352274 ~ 86555806 (+) True LOC110530844
XM_036986618.1 mRNA upstream 945608 85793000 ~ 85881217 (+) True LOC110531032
XM_021614109.2 mRNA upstream 1065867 85739005 ~ 85760958 (+) True LOC110530826
XM_036986641.1 mRNA downstream 84451 86912177 ~ 86920513 (+) False ly97.3
XM_036986895.1 mRNA downstream 175453 87003179 ~ 87406445 (+) True LOC110530822
XM_036986642.1 mRNA downstream 705224 87532950 ~ 87549838 (+) True LOC110519501
XM_036986647.1 mRNA downstream 741346 87569072 ~ 87661724 (+) False LOC110512128
XM_036986645.1 mRNA downstream 741346 87569072 ~ 87670895 (+) False LOC110512128
TU861161 other upstream 191365 86634784 ~ 86635460 (+) True G758045
TU860993 other upstream 294446 86531153 ~ 86532379 (+) True G757902
TU860829 other upstream 595366 86230351 ~ 86231459 (+) True G757754
TU860712 other upstream 708877 86117663 ~ 86117948 (+) True G757663
TU860498 other upstream 798551 85951968 ~ 86028274 (+) True G757472
TU861389 other downstream 84450 86912176 ~ 86920509 (+) False ly97.3
TU861390 other downstream 84450 86912176 ~ 86920509 (+) False ly97.3
TU861391 other downstream 84450 86912176 ~ 86920509 (+) True ly97.3
TU861418 other downstream 105720 86933446 ~ 86934011 (+) True G758259
TU861774 other downstream 889091 87716817 ~ 87717718 (+) True G758531

Expression Profile