RNA id: TU862295


Basic Information

Item Value
RNA id TU862295
length 368
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G758908
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87833754 ~ 87834480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tattggtgtcctttagtagtggtttctttgcagcaatttgaccatgaaggcctgatttatgcagtgtcctctgaacagttgatggcagtcctcatgacctatgagactctaaatcacggccggatgtgattcagcctggatgaacttttaataaggcacacctgttaattgaaatgcattccaggtgactacctcatcaagctggttgagagaatgccaagagtctgcaaagctgtcatcaaggcaaagggtggctactttgaagaatctcaaatataaaatatattttgatttgttggacactttttttttggttactacatgattccatgtgtgttatttcatagttttgatgtcttcactattat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU862258 lncRNA upstream 37347 87792997 ~ 87796407 (+) False G758886
TU862257 lncRNA upstream 37347 87794058 ~ 87796407 (+) False G758886
TU862253 lncRNA upstream 37347 87794122 ~ 87796407 (+) False G758886
TU862254 lncRNA upstream 37347 87794122 ~ 87796407 (+) False G758886
TU862256 lncRNA upstream 37347 87794122 ~ 87796407 (+) False G758886
TU862297 lncRNA downstream 2590 87837070 ~ 87837843 (+) True G758909
TU862269 lncRNA downstream 12453 87846933 ~ 87866192 (+) False G758891
TU862270 lncRNA downstream 12453 87846933 ~ 87851821 (+) False G758891
TU862271 lncRNA downstream 12453 87846933 ~ 87850341 (+) False G758891
TU862272 lncRNA downstream 12453 87846933 ~ 87866192 (+) False G758891
XM_036986650.1 mRNA upstream 58307 87745792 ~ 87775447 (+) True LOC110513441
XM_036986648.1 mRNA upstream 142011 87687931 ~ 87691743 (+) False LOC110512127
XM_036986649.1 mRNA upstream 142011 87687941 ~ 87691743 (+) False LOC110512127
XM_036986643.1 mRNA upstream 162650 87569072 ~ 87671104 (+) False LOC110512128
XM_036986662.1 mRNA downstream 182740 88017220 ~ 88059703 (+) False acss2l
XM_036986659.1 mRNA downstream 182747 88017227 ~ 88059703 (+) False acss2l
XM_036986661.1 mRNA downstream 182976 88017456 ~ 88059703 (+) False acss2l
XM_036986660.1 mRNA downstream 192304 88026784 ~ 88059703 (+) True acss2l
XM_036986671.1 mRNA downstream 790961 88625441 ~ 88642762 (+) True LOC110510807
TU862226 other upstream 100615 87732294 ~ 87733139 (+) True G758866
TU861774 other upstream 116036 87716817 ~ 87717718 (+) True G758531
TU861418 other upstream 899743 86933446 ~ 86934011 (+) True G758259
TU861390 other upstream 913245 86912176 ~ 86920509 (+) False ly97.3
TU862276 other downstream 40640 87875120 ~ 87876684 (+) True G758892
TU862389 other downstream 131212 87965692 ~ 87971929 (+) True G758976
TU862403 other downstream 157490 87991970 ~ 87995145 (+) True G758988
TU862451 other downstream 247541 88082021 ~ 88106947 (+) False G759020
TU862454 other downstream 247541 88082021 ~ 88106947 (+) True G759020

Expression Profile