RNA id: TU862297



Basic Information


Item Value
RNA id TU862297
length 754
lncRNA type antisense_over
GC content 0.46
exon number 2
gene id G758909
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87837070 ~ 87837843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACTGGAGTCAATCTGAGAGGAGGATTGGATAGGTATAAGCAATATGGCAAAATGTCCACCTACTGTATCCTTCTATGGGTTACTGCATATTTCTATGGGTTACTGTATCCTTATATGGGTTACTGTATCCTTATATGGGTTACTGTATCCTTATATGGGTTACTGTATCTTTCTATGGGTTACTGCATCTTTCTATGGGTTATAGGGGTGGTTTCTGGCCCTGGACATGCTGGTTACTATGCTACAGGTGAGAGGGTCTGATCTATCACAAGCCAAAGCCatgttgtcctcctcctctcccctgagacCAATATGCATGGTGGACTGTGTGGAGGTGGACAATGAGTAGTTGAAGCCACGCGGCAGTGTATTACAATGTTGCATTGTGGACCCTGTGATCCacgcagctgtgtgtgtgtggaaccaAGGACAGTGATAATCTCACTGATTAAATCTGATGCTGAATTCTGAACCGACTCCTTACTCCCTAAACCTTCATGTAGATCCAAGAGGAAACGTGGTGATATCTCCAAGTTGACGTCAGATAAGCTAGATAGGTGGATCATTCACCTGTCCAATCGAGAGCAGTGACTCTGTGTTAGGGTGCTATGGTCTAGGCGAGGGTAGGGTGCTCGGGGTCTATTTGGGACTCAGCAGAAGTCTTACTAGCAGCAGAGTTTGTTAGATGGACGCCGGGTTATCTTGAAGGACTCGTTGCTGTCAACGTCTGGATTCTCCAGAGGCGGAATCTGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU862295 lncRNA upstream 2590 87833754 ~ 87834480 (+) True G758908
TU862254 lncRNA upstream 40663 87794122 ~ 87796407 (+) False G758886
TU862269 lncRNA downstream 9090 87846933 ~ 87866192 (+) False G758891
TU862270 lncRNA downstream 9090 87846933 ~ 87851821 (+) False G758891
TU862271 lncRNA downstream 9090 87846933 ~ 87850341 (+) False G758891
TU862272 lncRNA downstream 9090 87846933 ~ 87866192 (+) False G758891
TU862273 lncRNA downstream 9090 87846933 ~ 87850341 (+) True G758891
XM_036986650.1 mRNA upstream 61623 87745792 ~ 87775447 (+) True LOC110513441
XM_036986648.1 mRNA upstream 145327 87687931 ~ 87691743 (+) False LOC110512127
XM_036986649.1 mRNA upstream 145327 87687941 ~ 87691743 (+) False LOC110512127
XM_036986643.1 mRNA upstream 165966 87569072 ~ 87671104 (+) False LOC110512128
XM_036986662.1 mRNA downstream 179377 88017220 ~ 88059703 (+) False acss2l
XM_036986659.1 mRNA downstream 179384 88017227 ~ 88059703 (+) False acss2l
XM_036986661.1 mRNA downstream 179613 88017456 ~ 88059703 (+) False acss2l
XM_036986660.1 mRNA downstream 188941 88026784 ~ 88059703 (+) True acss2l
XM_036986671.1 mRNA downstream 787598 88625441 ~ 88642762 (+) True LOC110510807
TU862226 other upstream 103931 87732294 ~ 87733139 (+) True G758866
TU861774 other upstream 119352 87716817 ~ 87717718 (+) True G758531
TU861418 other upstream 903059 86933446 ~ 86934011 (+) True G758259
TU861390 other upstream 916561 86912176 ~ 86920509 (+) False ly97.3
TU862276 other downstream 37277 87875120 ~ 87876684 (+) True G758892
TU862389 other downstream 127849 87965692 ~ 87971929 (+) True G758976
TU862403 other downstream 154127 87991970 ~ 87995145 (+) True G758988
TU862451 other downstream 244178 88082021 ~ 88106947 (+) False G759020
TU862454 other downstream 244178 88082021 ~ 88106947 (+) True G759020

Expression Profile