RNA id: TU862377


Basic Information

Item Value
RNA id TU862377
length 307
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G758967
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 87940119 ~ 87940447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtagtttggttcatcaggctgacccccagtcttcatggttcatcaggctgacctccagtctccatggagattactgagtagtttgggtcatcaggctgacctccagtctacatggaggagattactgagtagtttgggtcatcaggctgacctccagtctacatggaggagattactgagtagtttggttcatcaggctgacccccagtctccatggaggagattactgagtagtttggttcatcaggctgacccccagtcttcatggttcatcaggctgacccccagtctccatGGATCAGATTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU862375 lncRNA upstream 444 87937191 ~ 87939675 (+) True G758965
TU862371 lncRNA upstream 6272 87928327 ~ 87933847 (+) True G758962
TU862369 lncRNA upstream 12334 87925763 ~ 87927785 (+) True G758961
TU862336 lncRNA upstream 32466 87906777 ~ 87907653 (+) True G758935
TU862320 lncRNA upstream 53023 87885202 ~ 87887096 (+) False G758926
TU862379 lncRNA downstream 463 87940910 ~ 87942461 (+) True G758968
TU862381 lncRNA downstream 2676 87943123 ~ 87944229 (+) True G758969
TU862386 lncRNA downstream 17459 87957906 ~ 87958399 (+) True G758974
TU862390 lncRNA downstream 19076 87959523 ~ 87965925 (+) False G758976
TU862405 lncRNA downstream 56796 87997243 ~ 87998848 (+) True G758989
XM_036986650.1 mRNA upstream 164672 87745792 ~ 87775447 (+) True LOC110513441
XM_036986648.1 mRNA upstream 248376 87687931 ~ 87691743 (+) False LOC110512127
XM_036986649.1 mRNA upstream 248376 87687941 ~ 87691743 (+) False LOC110512127
XM_036986643.1 mRNA upstream 269015 87569072 ~ 87671104 (+) False LOC110512128
XM_036986662.1 mRNA downstream 76773 88017220 ~ 88059703 (+) False acss2l
XM_036986659.1 mRNA downstream 76780 88017227 ~ 88059703 (+) False acss2l
XM_036986661.1 mRNA downstream 77009 88017456 ~ 88059703 (+) False acss2l
XM_036986660.1 mRNA downstream 86337 88026784 ~ 88059703 (+) True acss2l
XM_036986671.1 mRNA downstream 684994 88625441 ~ 88642762 (+) True LOC110510807
TU862276 other upstream 63435 87875120 ~ 87876684 (+) True G758892
TU862226 other upstream 206980 87732294 ~ 87733139 (+) True G758866
TU861774 other upstream 222401 87716817 ~ 87717718 (+) True G758531
TU861418 other upstream 1006108 86933446 ~ 86934011 (+) True G758259
TU861391 other upstream 1019610 86912176 ~ 86920509 (+) True ly97.3
TU862389 other downstream 25245 87965692 ~ 87971929 (+) True G758976
TU862403 other downstream 51523 87991970 ~ 87995145 (+) True G758988
TU862451 other downstream 141574 88082021 ~ 88106947 (+) False G759020
TU862454 other downstream 141574 88082021 ~ 88106947 (+) True G759020
TU862468 other downstream 168559 88109006 ~ 88110300 (+) True G759031

Expression Profile