RNA id: TU862591


Basic Information

Item Value
RNA id TU862591
length 299
lncRNA type intronic
GC content 0.39
exon number 2
gene id G759112
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88321183 ~ 88321803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtataatatagtagagtagtgtagagtacagtaggaaGTAGTAGGTATACTAGTCtatacaggtagagtagagtagcatgtacgggtagagtagagtagtttaTACAGGTATAGTAGAGTAGCCtatacaggtagagtagagtagcctatacaggtagagtagagtagcctatacaggtagagtagagtagcctaTACAGGTAGAGTAGAATAGCCtatacaggtagagtagagtagcctaTACAGGTAGAGTAGAATAGCCtatacaggtagagtagagtagtttatacaggtagagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU862573 lncRNA upstream 15369 88302975 ~ 88305814 (+) True G759099
TU862567 lncRNA upstream 20099 88297923 ~ 88301084 (+) True G759098
TU862560 lncRNA upstream 37196 88282847 ~ 88283987 (+) True G759091
TU862556 lncRNA upstream 44006 88276489 ~ 88277177 (+) True G759089
TU862550 lncRNA upstream 56490 88263953 ~ 88264693 (+) True G759085
TU862604 lncRNA downstream 18416 88340219 ~ 88341805 (+) True G759119
TU862609 lncRNA downstream 20603 88342406 ~ 88346482 (+) True G759121
TU862615 lncRNA downstream 24811 88346614 ~ 88347020 (+) True G759125
TU862931 lncRNA downstream 45984 88367787 ~ 88368157 (+) True G759361
TU862937 lncRNA downstream 50364 88372167 ~ 88372431 (+) True G759365
XM_036986662.1 mRNA upstream 261480 88017220 ~ 88059703 (+) False acss2l
XM_036986659.1 mRNA upstream 261480 88017227 ~ 88059703 (+) False acss2l
XM_036986661.1 mRNA upstream 261480 88017456 ~ 88059703 (+) False acss2l
XM_036986660.1 mRNA upstream 261480 88026784 ~ 88059703 (+) True acss2l
XM_036986650.1 mRNA upstream 545736 87745792 ~ 87775447 (+) True LOC110513441
XM_036986671.1 mRNA downstream 303638 88625441 ~ 88642762 (+) True LOC110510807
XM_036986676.1 mRNA downstream 324597 88646400 ~ 88662958 (+) False LOC110510805
XM_036986675.1 mRNA downstream 324599 88646402 ~ 88663381 (+) False LOC110510805
XM_036986673.1 mRNA downstream 324599 88646402 ~ 88667320 (+) False LOC110510805
XM_036986672.1 mRNA downstream 324600 88646403 ~ 88667320 (+) True LOC110510805
TU862468 other upstream 210883 88109006 ~ 88110300 (+) True G759031
TU862451 other upstream 214236 88082021 ~ 88106947 (+) False G759020
TU862454 other upstream 214236 88082021 ~ 88106947 (+) True G759020
TU862403 other upstream 326038 87991970 ~ 87995145 (+) True G758988
TU862389 other upstream 349254 87965692 ~ 87971929 (+) True G758976
TU863171 other downstream 376171 88697974 ~ 88701419 (+) False G759556
TU863172 other downstream 376171 88697974 ~ 88701075 (+) False G759556
TU863230 other downstream 539276 88861079 ~ 88861828 (+) False G759598
TU863232 other downstream 539476 88861279 ~ 88861828 (+) True G759598
TU863313 other downstream 758762 89080565 ~ 89094340 (+) False slc25a24l

Expression Profile