RNA id: TU863036



Basic Information


Item Value
RNA id TU863036
length 233
lncRNA type intronic
GC content 0.37
exon number 2
gene id G759446
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88488311 ~ 88491151 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cacatttggctaccaaaaaaaatccataaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaagcctcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctctcctgaatcccaggagaaaatgaccgcacctgaagattacgcacaaatttagacaaagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU863032 lncRNA downstream 11158 88476591 ~ 88477153 (-) True G759442
TU863005 lncRNA downstream 47683 88431204 ~ 88440628 (-) False G759421
TU863006 lncRNA downstream 49494 88430998 ~ 88438817 (-) False G759421
TU863008 lncRNA downstream 49494 88432791 ~ 88438817 (-) False G759421
TU863004 lncRNA downstream 49494 88436523 ~ 88438817 (-) True G759421
TU863072 lncRNA upstream 28901 88520052 ~ 88520659 (-) True G759478
TU863073 lncRNA upstream 30103 88521254 ~ 88521646 (-) True G759479
TU863749 lncRNA upstream 57365 88548516 ~ 88548864 (-) True G759987
TU863751 lncRNA upstream 58468 88549619 ~ 88550719 (-) True G759989
TU863783 lncRNA upstream 99790 88590941 ~ 88597105 (-) True G760001
XM_036986670.1 mRNA downstream 126005 88342455 ~ 88362306 (-) True LOC110509139
XM_036986663.1 mRNA downstream 156816 88085908 ~ 88331495 (-) False LOC110518901
XM_036986685.1 mRNA upstream 180314 88671465 ~ 88694158 (-) False LOC110530889
XM_036986684.1 mRNA upstream 180314 88671465 ~ 88710355 (-) False LOC110530889
XM_036986679.1 mRNA upstream 180314 88671465 ~ 88715571 (-) False LOC110530889
XM_036986680.1 mRNA upstream 180314 88671465 ~ 88715571 (-) False LOC110530889
XM_036986681.1 mRNA upstream 180314 88671465 ~ 88715571 (-) False LOC110530889
TU863003 other downstream 44843 88431204 ~ 88443468 (-) False G759421
TU862683 other downstream 545489 87940904 ~ 87942822 (-) True LOC110530858
TU860865 other downstream 2256119 86230374 ~ 86232192 (-) False G757788
TU863742 other upstream 44489 88535640 ~ 88536047 (-) True G759982
TU863763 other upstream 172453 88663604 ~ 88665140 (-) False G759998
TU863860 other upstream 211840 88702991 ~ 88704054 (-) True G760051
TU863910 other upstream 336833 88827984 ~ 88830811 (-) False LOC110530888
TU863899 other upstream 336920 88828071 ~ 88830811 (-) False LOC110530888

Expression Profile