RNA id: TU863073


Basic Information

Item Value
RNA id TU863073
length 279
lncRNA type intronic
GC content 0.45
exon number 2
gene id G759479
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88521254 ~ 88521646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CATATTGACAGTACTAGACAGAGCAGAGAAGCTCTCATATTGACAGTACTAGACAGAGCAGAGAAGCTCTCATATGGGCAGTACTAGACAGAGCAGAGGAGCTCTCATATTGACAGAAGTACAAGACAGAGCAGAGGAGCTCTCATATTGACAGTACTAGACAGAGCAGAGAAGCTCTCATATTGACAGTACTAGACAGAGCAGAGAAGCTCTCATATTGACAGTACTAGACAGAGCAGAGGAGCTCTCATATTGACAGCAGTACTAGACAGAGCAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU863072 lncRNA downstream 595 88520052 ~ 88520659 (-) True G759478
TU863036 lncRNA downstream 30103 88488311 ~ 88491151 (-) True G759446
TU863032 lncRNA downstream 44101 88476591 ~ 88477153 (-) True G759442
TU863008 lncRNA downstream 82437 88432791 ~ 88438817 (-) False G759421
TU863749 lncRNA upstream 26870 88548516 ~ 88548864 (-) True G759987
TU863751 lncRNA upstream 27973 88549619 ~ 88550719 (-) True G759989
TU863783 lncRNA upstream 69295 88590941 ~ 88597105 (-) True G760001
TU863789 lncRNA upstream 79338 88600984 ~ 88603305 (-) True G760003
TU863799 lncRNA upstream 99736 88621382 ~ 88621655 (-) True G760012
XM_036986670.1 mRNA downstream 158948 88342455 ~ 88362306 (-) True LOC110509139
XM_036986663.1 mRNA downstream 189759 88085908 ~ 88331495 (-) False LOC110518901
XM_036986685.1 mRNA upstream 149819 88671465 ~ 88694158 (-) False LOC110530889
XM_036986684.1 mRNA upstream 149819 88671465 ~ 88710355 (-) False LOC110530889
XM_036986679.1 mRNA upstream 149819 88671465 ~ 88715571 (-) False LOC110530889
XM_036986680.1 mRNA upstream 149819 88671465 ~ 88715571 (-) False LOC110530889
XM_036986681.1 mRNA upstream 149819 88671465 ~ 88715571 (-) False LOC110530889
TU863003 other downstream 77786 88431204 ~ 88443468 (-) False G759421
TU862683 other downstream 578432 87940904 ~ 87942822 (-) True LOC110530858
TU860865 other downstream 2289062 86230374 ~ 86232192 (-) False G757788
TU863742 other upstream 13994 88535640 ~ 88536047 (-) True G759982
TU863763 other upstream 141958 88663604 ~ 88665140 (-) False G759998
TU863860 other upstream 181345 88702991 ~ 88704054 (-) True G760051
TU863910 other upstream 306338 88827984 ~ 88830811 (-) False LOC110530888
TU863899 other upstream 306425 88828071 ~ 88830811 (-) False LOC110530888

Expression Profile