RNA id: TU863107


Basic Information

Item Value
RNA id TU863107
length 288
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G759509
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88591342 ~ 88597730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggatgaccagggatgttctctgtttagtgagtcctccagatcagaggctggtagggatgaccagggatgttctctgtttagtgagtccaccagatcagaggctggtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagagatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagagatgaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU863092 lncRNA upstream 34481 88556144 ~ 88556861 (+) True G759496
TU863090 lncRNA upstream 39740 88549802 ~ 88551602 (+) True G759494
TU863079 lncRNA upstream 54904 88536190 ~ 88536438 (+) True G759485
TU863052 lncRNA upstream 81775 88509203 ~ 88509567 (+) True G759461
TU863048 lncRNA upstream 85078 88506027 ~ 88506264 (+) True G759457
TU863112 lncRNA downstream 692 88598422 ~ 88690153 (+) True G759513
TU863120 lncRNA downstream 6266 88603996 ~ 88604621 (+) True G759516
TU863141 lncRNA downstream 37143 88634873 ~ 88635724 (+) False G759533
TU863142 lncRNA downstream 37639 88635369 ~ 88635724 (+) True G759533
TU863146 lncRNA downstream 52655 88650385 ~ 88650992 (+) True G759536
XM_036986662.1 mRNA upstream 531639 88017220 ~ 88059703 (+) False acss2l
XM_036986659.1 mRNA upstream 531639 88017227 ~ 88059703 (+) False acss2l
XM_036986661.1 mRNA upstream 531639 88017456 ~ 88059703 (+) False acss2l
XM_036986660.1 mRNA upstream 531639 88026784 ~ 88059703 (+) True acss2l
XM_036986650.1 mRNA upstream 815895 87745792 ~ 87775447 (+) True LOC110513441
XM_036986671.1 mRNA downstream 27711 88625441 ~ 88642762 (+) True LOC110510807
XM_036986676.1 mRNA downstream 48670 88646400 ~ 88662958 (+) False LOC110510805
XM_036986675.1 mRNA downstream 48672 88646402 ~ 88663381 (+) False LOC110510805
XM_036986673.1 mRNA downstream 48672 88646402 ~ 88667320 (+) False LOC110510805
XM_036986672.1 mRNA downstream 48673 88646403 ~ 88667320 (+) True LOC110510805
TU862468 other upstream 481042 88109006 ~ 88110300 (+) True G759031
TU862451 other upstream 484395 88082021 ~ 88106947 (+) False G759020
TU862454 other upstream 484395 88082021 ~ 88106947 (+) True G759020
TU862403 other upstream 596197 87991970 ~ 87995145 (+) True G758988
TU862389 other upstream 619413 87965692 ~ 87971929 (+) True G758976
TU863171 other downstream 100244 88697974 ~ 88701419 (+) False G759556
TU863172 other downstream 100244 88697974 ~ 88701075 (+) False G759556
TU863230 other downstream 263349 88861079 ~ 88861828 (+) False G759598
TU863232 other downstream 263549 88861279 ~ 88861828 (+) True G759598
TU863313 other downstream 482835 89080565 ~ 89094340 (+) False slc25a24l

Expression Profile