RNA id: TU863941



Basic Information


Item Value
RNA id TU863941
length 327
lncRNA type antisense_over
GC content 0.38
exon number 1
gene id G760103
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88903428 ~ 88903754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


caacacTGTTAATATAATGTTAGACAATCAGGTTCCTATCATAGTAAATCTAGGTTTTAATGGATTGTCAAAATGCTTTAGTAGTTTTCTTAACAGGAAATAAAAACAGCCCTCTGCTTTGTGAAAGACCAAGGACCAGAACAGAATattcaggacagagaggagagctggtagcagagagagacacaatccTGGTCCTGGATCAACTGTAACCTCTAATATAATAGTTCAGAGCAAATGATGAATGATCCAGGATCTGTAATTAGTCATTGAACCTGGCAACGAGGTTAAGGATTTGATGGAGGAGGACACAACCTAATAACAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU863962 lncRNA downstream 639 88901782 ~ 88902789 (-) True G760124
TU863959 lncRNA downstream 6685 88896537 ~ 88896743 (-) True G760121
TU863953 lncRNA downstream 19067 88884115 ~ 88884361 (-) True G760115
TU863927 lncRNA downstream 41885 88861111 ~ 88861543 (-) True G760097
TU863926 lncRNA downstream 43430 88859795 ~ 88859998 (-) True G760096
TU863963 lncRNA upstream 4251 88908005 ~ 88908252 (-) True G760125
TU863965 lncRNA upstream 11248 88915002 ~ 89250121 (-) True G760127
TU863981 lncRNA upstream 50920 88954674 ~ 88955021 (-) True G760141
TU863950 lncRNA upstream 51696 88955450 ~ 88971355 (-) True LOC110530883
TU863988 lncRNA upstream 71333 88975087 ~ 88977036 (-) True G760147
XM_036986694.1 mRNA downstream 20412 88864561 ~ 88883016 (-) True LOC110530885
XM_036986693.1 mRNA downstream 56827 88834557 ~ 88846601 (-) True pak1ip1
XM_036986689.1 mRNA downstream 70199 88828071 ~ 88833229 (-) False LOC110530888
XM_036986692.1 mRNA downstream 70275 88828071 ~ 88833153 (-) False LOC110530888
XM_036986686.1 mRNA downstream 71693 88828071 ~ 88831735 (-) False LOC110530888
XM_036986697.1 mRNA upstream 1558 88905312 ~ 88917235 (-) False LOC110530884
XM_021614171.2 mRNA upstream 1558 88905312 ~ 88919238 (-) False LOC110530884
XM_021614174.2 mRNA upstream 1558 88905312 ~ 88919238 (-) False LOC110530884
XM_036986698.1 mRNA upstream 1558 88905312 ~ 88919238 (-) False LOC110530884
XM_036986699.1 mRNA upstream 1558 88905312 ~ 88919238 (-) False LOC110530884
TU863903 other downstream 71700 88828133 ~ 88831728 (-) False LOC110530888
TU863905 other downstream 71700 88828133 ~ 88831728 (-) False LOC110530888
TU863908 other downstream 72340 88828133 ~ 88831088 (-) False LOC110530888
TU863898 other downstream 72481 88828133 ~ 88830947 (-) False LOC110530888
TU864029 other upstream 113295 89017049 ~ 89017979 (-) True G760165
TU864056 other upstream 175544 89079298 ~ 89081345 (-) True G760182
TU864071 other upstream 196090 89099844 ~ 89102382 (-) True G760192
TU864226 other upstream 427527 89331281 ~ 89332776 (-) True G760306
TU864256 other upstream 470131 89373885 ~ 89407502 (-) True LOC118965582

Expression Profile