RNA id: TU863352


Basic Information

Item Value
RNA id TU863352
length 265
lncRNA type intronic
GC content 0.44
exon number 2
gene id G759682
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89048213 ~ 89048777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctcagtattaacaccaggtctctctctcagtattaacaccaggtctctctctctctctcagtattaacaccaggtctctctctcagtattaacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU863345 lncRNA upstream 29447 89018171 ~ 89018766 (+) True G759678
TU863332 lncRNA upstream 39222 89008013 ~ 89008991 (+) False G759668
TU863315 lncRNA downstream 31146 89079923 ~ 89139486 (+) False slc25a24l
TU863348 lncRNA downstream 88820 89137597 ~ 89137931 (+) True G759680
TU863388 lncRNA downstream 106239 89155016 ~ 89155613 (+) True G759716
TU863395 lncRNA downstream 131898 89180675 ~ 89181326 (+) True G759723
TU863309 lncRNA downstream 172223 89221000 ~ 89223706 (+) True usp33
XR_005052997.1 mRNA upstream 144379 88886834 ~ 88903834 (+) False LOC118965580
XM_036986673.1 mRNA upstream 380893 88646402 ~ 88667320 (+) False LOC110510805
XM_036986672.1 mRNA upstream 380893 88646403 ~ 88667320 (+) True LOC110510805
XM_036986675.1 mRNA upstream 384832 88646402 ~ 88663381 (+) False LOC110510805
XM_036986676.1 mRNA upstream 385255 88646400 ~ 88662958 (+) False LOC110510805
XM_021614153.2 mRNA downstream 25847 89074624 ~ 89094403 (+) False slc25a24l
XM_021614152.2 mRNA downstream 25848 89074625 ~ 89094403 (+) False slc25a24l
XM_036986711.1 mRNA downstream 46059 89094836 ~ 89113049 (+) False fubp1
XM_036986712.1 mRNA downstream 46059 89094836 ~ 89113049 (+) False fubp1
XM_036986713.1 mRNA downstream 46059 89094836 ~ 89113049 (+) False fubp1
TU863230 other upstream 186385 88861079 ~ 88861828 (+) False G759598
TU863232 other upstream 186385 88861279 ~ 88861828 (+) True G759598
TU863171 other upstream 346794 88697974 ~ 88701419 (+) False G759556
TU863172 other upstream 347138 88697974 ~ 88701075 (+) False G759556
TU862468 other upstream 937913 88109006 ~ 88110300 (+) True G759031
TU863313 other downstream 31788 89080565 ~ 89094340 (+) False slc25a24l
TU863314 other downstream 31788 89080565 ~ 89094394 (+) True slc25a24l
TU863518 other downstream 519226 89568003 ~ 89659347 (+) True LOC118965583
TU863611 other downstream 647643 89696420 ~ 89696907 (+) True G759892
TU864640 other downstream 1111493 90160270 ~ 90208959 (+) False G760623

Expression Profile