RNA id: TU863581



Basic Information


Item Value
RNA id TU863581
length 564
lncRNA type antisense_over
GC content 0.48
exon number 2
gene id G759869
representative False

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89636833 ~ 89638330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCCTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTGGAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGGAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCCTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTGGAGGCCTTTCCTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCCTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCCTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAGGCCTTTCCTCTTCTTCACTAGTGTCTCTGAAggcctttcctcttcctcctcgtaaAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU863573 lncRNA upstream 14684 89622168 ~ 89622801 (+) True G759862
TU863568 lncRNA upstream 20722 89615963 ~ 89616763 (+) True G759857
TU863559 lncRNA upstream 26815 89596814 ~ 89610670 (+) True G759850
TU863552 lncRNA upstream 29148 89594454 ~ 89608337 (+) False G759847
TU863553 lncRNA upstream 29148 89594454 ~ 89608337 (+) False G759847
TU863590 lncRNA downstream 16449 89654779 ~ 89679102 (+) False G759873
TU863589 lncRNA downstream 16830 89655160 ~ 89668252 (+) True G759873
TU863601 lncRNA downstream 49798 89688128 ~ 89688933 (+) True G759884
TU863606 lncRNA downstream 53219 89691549 ~ 89692102 (+) True G759887
TU863620 lncRNA downstream 74861 89713191 ~ 89713407 (+) True G759901
XM_036986724.1 mRNA upstream 62321 89560138 ~ 89575164 (+) False LOC118965583
XM_036986722.1 mRNA upstream 315932 89296952 ~ 89321553 (+) True pigk
XM_036986721.1 mRNA upstream 346144 89226127 ~ 89291341 (+) True LOC110530860
XM_021614193.2 mRNA downstream 152580 89790910 ~ 89837790 (+) False yipf1
XM_021614191.2 mRNA downstream 152624 89790954 ~ 89837790 (+) True yipf1
XM_021614336.2 mRNA downstream 215136 89853466 ~ 89854375 (+) True zgc:113691
XM_036986748.1 mRNA downstream 223491 89861821 ~ 89911594 (+) False ndc1
XM_036986747.1 mRNA downstream 223492 89861822 ~ 89911594 (+) True ndc1
TU863314 other upstream 543091 89080565 ~ 89094394 (+) True slc25a24l
TU863313 other upstream 543145 89080565 ~ 89094340 (+) False slc25a24l
TU863230 other upstream 775657 88861079 ~ 88861828 (+) False G759598
TU863232 other upstream 775657 88861279 ~ 88861828 (+) True G759598
TU863172 other upstream 936410 88697974 ~ 88701075 (+) False G759556
TU863611 other downstream 58090 89696420 ~ 89696907 (+) True G759892
TU864640 other downstream 521940 90160270 ~ 90208959 (+) False G760623
TU864637 other downstream 522984 90161314 ~ 90208959 (+) True G760623
TU864778 other downstream 735757 90374087 ~ 90389077 (+) False G760718
TU864805 other downstream 758592 90396922 ~ 90400472 (+) True G760718

Expression Profile