RNA id: TU864503


Basic Information

Item Value
RNA id TU864503
length 395
lncRNA type intronic
GC content 0.49
exon number 2
gene id G760511
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 89979590 ~ 89980502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGGAGACAGTTTGAATGAAAGGCTGGGAGTGGAGACAGTTTGGATGAAAGGCTGGGAGTGGAGACAGTTTGGATGAAAGGCTGGGAGTGGAGACAGTTAGGATGAAAGGCTGAGAGTGGAGACAGTTAGGATGAAAGACTGGGAGTGGAGACAGTTAGGATGAAAGGCTGAGAGTGGAGACAGTTAGGATGAAAGGCTGGGAGTGGAGACAGTTTGGATGAAAGGCTGAGAGTGGAGACAGTTAGGATGAATGGCTGAGAGTGGAGACAGTTAGGATGAATGGCTGAGAGTGGAGACAGTTAGGATGAAAGGCTGAGAGTGGAGACAGTTTGAATGAAAGGCTGAGAGTGGAGACAGTTTGAATGAAAGGCTGGGAGTGGAGACAGTTTGGATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU864492 lncRNA upstream 30036 89949135 ~ 89949637 (+) True G760503
TU864487 lncRNA upstream 55273 89923060 ~ 89924400 (+) True G760498
TU864478 lncRNA upstream 64504 89914970 ~ 89915169 (+) True G760491
TU863737 lncRNA upstream 67369 89911869 ~ 89912304 (+) True G759979
TU863728 lncRNA upstream 121933 89857459 ~ 89857740 (+) True G759970
TU864505 lncRNA downstream 13972 89994474 ~ 89994710 (+) True G760513
TU864507 lncRNA downstream 17445 89997947 ~ 89998361 (+) True G760515
TU864508 lncRNA downstream 17978 89998480 ~ 89998878 (+) True G760516
TU864509 lncRNA downstream 18432 89998934 ~ 89999607 (+) True G760517
TU864517 lncRNA downstream 58997 90039499 ~ 90040063 (+) True G760524
XM_036986757.1 mRNA upstream 5409 89967509 ~ 89974264 (+) True acadm
XM_021614196.2 mRNA upstream 21956 89951111 ~ 89957717 (+) True rps8a
XR_005053039.1 mRNA upstream 26989 89952616 ~ 89952684 (+) True LOC118965661
XR_005053040.1 mRNA upstream 27335 89952232 ~ 89952338 (+) True LOC118965662
XM_036986752.1 mRNA upstream 32030 89932208 ~ 89947643 (+) True hectd3
XM_036986763.1 mRNA downstream 50522 90031024 ~ 90094617 (+) False st6galnac3
XM_036986764.1 mRNA downstream 50522 90031024 ~ 90094617 (+) False st6galnac3
XM_036986765.1 mRNA downstream 248159 90228661 ~ 90295350 (+) False LOC110515626
XM_036986766.1 mRNA downstream 248159 90228661 ~ 90295350 (+) False LOC110515626
XM_036986767.1 mRNA downstream 248159 90228661 ~ 90295350 (+) False LOC110515626
TU863611 other upstream 282766 89696420 ~ 89696907 (+) True G759892
TU863518 other upstream 320326 89568003 ~ 89659347 (+) True LOC118965583
TU863314 other upstream 885279 89080565 ~ 89094394 (+) True slc25a24l
TU863313 other upstream 885333 89080565 ~ 89094340 (+) False slc25a24l
TU863232 other upstream 1117845 88861279 ~ 88861828 (+) True G759598
TU864640 other downstream 179768 90160270 ~ 90208959 (+) False G760623
TU864637 other downstream 180812 90161314 ~ 90208959 (+) True G760623
TU864778 other downstream 393585 90374087 ~ 90389077 (+) False G760718
TU864805 other downstream 416420 90396922 ~ 90400472 (+) True G760718
TU864957 other downstream 719793 90700295 ~ 90709652 (+) True LOC110530875

Expression Profile