RNA id: TU864839


Basic Information

Item Value
RNA id TU864839
length 323
lncRNA type intronic
GC content 0.49
exon number 2
gene id G760734
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90382732 ~ 90386980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TACCCTAAAGGAACCTAGCCTACCCTAAAGGAACCTAGCCTACCCTAATGGAACCTAACCTACCCTAAAGGAACCTAGCCTAACCTGACCTAAAGTTACCCACCTACCCTAAAGGAACCTAGCCTACCCTAAAGGAACCTAGCCTAACCTGACCTAAAGTAACCCAGCCTACCCTAAAGTAACCCAGCCTACCCTAAAGGAACCTAGCCTAACCTGACCTAAAGTTACCCACCTACCCTAAAGGAACCTAGCCTACCCTAAAGGAACCTAGCCTACCCTAAAGGAACCTAGCCTACCCTAAAGGAACCTAGCCTACCCTAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU864759 lncRNA upstream 38668 90343210 ~ 90344064 (+) True G760715
TU864702 lncRNA upstream 87386 90293230 ~ 90295346 (+) False LOC110515626
TU864791 lncRNA downstream 2459 90389439 ~ 90400472 (+) False G760718
TU864797 lncRNA downstream 2459 90389439 ~ 90400472 (+) False G760718
TU864820 lncRNA downstream 2459 90389439 ~ 90400472 (+) False G760718
TU864822 lncRNA downstream 2459 90389439 ~ 90400472 (+) False G760718
TU864849 lncRNA downstream 32406 90419386 ~ 90420839 (+) True G760742
XM_036986765.1 mRNA upstream 87382 90228661 ~ 90295350 (+) False LOC110515626
XM_036986766.1 mRNA upstream 87382 90228661 ~ 90295350 (+) False LOC110515626
XM_036986767.1 mRNA upstream 87382 90228661 ~ 90295350 (+) False LOC110515626
XM_036986763.1 mRNA upstream 288115 90031024 ~ 90094617 (+) False st6galnac3
XR_005053009.1 mRNA downstream 11619 90398599 ~ 90400473 (+) True LOC118965588
XM_036986771.1 mRNA downstream 52820 90439800 ~ 90545258 (+) True LOC110517228
XM_036986776.1 mRNA downstream 205010 90591990 ~ 90646224 (+) False LOC110531056
XM_036986775.1 mRNA downstream 205023 90592003 ~ 90650861 (+) False LOC110531056
XM_036986772.1 mRNA downstream 205024 90592004 ~ 90652705 (+) False LOC110531056
TU864640 other upstream 173773 90160270 ~ 90208959 (+) False G760623
TU864637 other upstream 173773 90161314 ~ 90208959 (+) True G760623
TU863611 other upstream 685825 89696420 ~ 89696907 (+) True G759892
TU863518 other upstream 723385 89568003 ~ 89659347 (+) True LOC118965583
TU863314 other upstream 1288338 89080565 ~ 89094394 (+) True slc25a24l
TU864805 other downstream 9942 90396922 ~ 90400472 (+) True G760718
TU864957 other downstream 313315 90700295 ~ 90709652 (+) True LOC110530875
TU864974 other downstream 350311 90737291 ~ 90743084 (+) True ndufb3
TU864981 other downstream 383137 90770117 ~ 90771037 (+) True G760857
TU865491 other downstream 566012 90952992 ~ 90955079 (+) False G761244

Expression Profile