RNA id: TU864967


Basic Information

Item Value
RNA id TU864967
length 538
lncRNA type antisense_over
GC content 0.48
exon number 2
gene id G760844
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90692425 ~ 90693044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGACCTCATAGAGTTTGGTAATGGGTAGGTTGTTACCAGTGTACTGATATCTGACCTCATAGAGTTTGGTAATGGGTAGGTTGTTACCAGTGTACTGATATCTGACCTCATAGAGTTTGGTAATGGGTAGGTTGTTACCAGTGTACTGATATCTGACCTCATAGAGTTTGGTAATGGGTAGGTTGTTACCAGTGTACTGATATCTGACCTCATAGAGGCTTCCATCTCTGAGGTCATGTATTTCCTGTTAAAGCAGTGACTCAACTATGTTGTCAATATGATAAGGTTTGGAGAGACTTACCCATCTGGGCCATCCTGTTGGAGCGTTTGACCGTCTGAAAGCTGAACACTGAtgcccctcctcctgctgctgctgttacacactcctccccctcttcagACAGGACACAGTCAGACAGGACACAGTCAGAGACTCCCCACACAgtcagacaggacacagacagacaggacacagccaggcaggacacacacacacagccaggcaggacacacacacacagccaggcaggacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU864960 lncRNA upstream 30912 90661231 ~ 90661513 (+) True G760837
TU864955 lncRNA upstream 34307 90657807 ~ 90658118 (+) True G760832
TU864939 lncRNA upstream 92641 90599041 ~ 90599784 (+) True G760817
TU864920 lncRNA upstream 106773 90585116 ~ 90585652 (+) True G760802
TU864909 lncRNA upstream 129531 90562667 ~ 90562894 (+) True G760794
TU864996 lncRNA downstream 35485 90728529 ~ 90729541 (+) True G760871
TU864997 lncRNA downstream 37946 90730990 ~ 90732388 (+) True G760872
TU865014 lncRNA downstream 112096 90805140 ~ 90805628 (+) True G760886
TU865015 lncRNA downstream 112586 90805630 ~ 90862789 (+) True G760887
TU865020 lncRNA downstream 125631 90818675 ~ 90824470 (+) True G760892
XM_036986780.1 mRNA upstream 17561 90658311 ~ 90674864 (+) False zgc:162816
XM_036986778.1 mRNA upstream 17561 90658313 ~ 90674864 (+) False zgc:162816
XM_036986779.1 mRNA upstream 17561 90658313 ~ 90674864 (+) False zgc:162816
XM_036986777.1 mRNA upstream 17561 90658315 ~ 90674864 (+) True zgc:162816
XM_036986772.1 mRNA upstream 39720 90592004 ~ 90652705 (+) False LOC110531056
XM_021614166.2 mRNA downstream 7144 90700188 ~ 90709778 (+) False LOC110530875
XM_036986785.1 mRNA downstream 28103 90721147 ~ 90736113 (+) False pecr
XM_036986784.1 mRNA downstream 28110 90721154 ~ 90728081 (+) True pecr
XM_036986786.1 mRNA downstream 44187 90737231 ~ 90743084 (+) False ndufb3
XR_005053010.1 mRNA downstream 86079 90779123 ~ 90785701 (+) False LOC110530867
TU864805 other upstream 291953 90396922 ~ 90400472 (+) True G760718
TU864778 other upstream 303348 90374087 ~ 90389077 (+) False G760718
TU864640 other upstream 483466 90160270 ~ 90208959 (+) False G760623
TU864637 other upstream 483466 90161314 ~ 90208959 (+) True G760623
TU863611 other upstream 995518 89696420 ~ 89696907 (+) True G759892
TU864957 other downstream 7251 90700295 ~ 90709652 (+) True LOC110530875
TU864974 other downstream 44247 90737291 ~ 90743084 (+) True ndufb3
TU864981 other downstream 77073 90770117 ~ 90771037 (+) True G760857
TU865491 other downstream 259948 90952992 ~ 90955079 (+) False G761244
TU865499 other downstream 259948 90952992 ~ 90955079 (+) False G761244

Expression Profile