RNA id: TU865455



Basic Information


Item Value
RNA id TU865455
length 345
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G761221
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90878295 ~ 90878639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtatctggtggtccctatagtccctatagctgtatctggtggtccctatagtccccatagctgtatctggtggtccctatagctgtatctagtggtccctatagtccctatagctgtatctggtggtccctatagtccctatagctgtatctggtggtccctatagtccctatagctgtatctggtggtccctatagctgtatctggtggtccctatagtccctatagctgtatctggtggtccctatagctgaatctggtggtccctatagtccctaagctgtatctggtggtccctatagctgtatctagtggtccctatagtccctatagctgaatctggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU865015 lncRNA upstream 15506 90805630 ~ 90862789 (+) True G760887
TU865022 lncRNA upstream 46537 90830941 ~ 90831758 (+) True G760894
TU865020 lncRNA upstream 53825 90818675 ~ 90824470 (+) True G760892
TU865014 lncRNA upstream 72667 90805140 ~ 90805628 (+) True G760886
TU864997 lncRNA upstream 145907 90730990 ~ 90732388 (+) True G760872
TU865461 lncRNA downstream 25052 90903691 ~ 90906901 (+) True G761226
TU865462 lncRNA downstream 25948 90904587 ~ 90912813 (+) True G761227
TU865468 lncRNA downstream 39622 90918261 ~ 90918633 (+) False G761231
TU865470 lncRNA downstream 39687 90918326 ~ 90919334 (+) False G761231
TU865473 lncRNA downstream 39687 90918326 ~ 90918633 (+) False G761231
XM_036986791.1 mRNA upstream 47770 90799988 ~ 90830525 (+) True LOC110530865
XM_021614155.2 mRNA upstream 81357 90779252 ~ 90796938 (+) True LOC110530867
XR_005053010.1 mRNA upstream 92594 90779123 ~ 90785701 (+) False LOC110530867
XM_036986786.1 mRNA upstream 135211 90737231 ~ 90743084 (+) False ndufb3
XM_036986784.1 mRNA upstream 150214 90721154 ~ 90728081 (+) True pecr
XM_036986792.1 mRNA downstream 35134 90913773 ~ 90916737 (+) True LOC110530903
XM_036986799.1 mRNA downstream 361247 91239886 ~ 91260968 (+) True rgs20
TU864981 other upstream 107258 90770117 ~ 90771037 (+) True G760857
TU864974 other upstream 135211 90737291 ~ 90743084 (+) True ndufb3
TU864957 other upstream 168643 90700295 ~ 90709652 (+) True LOC110530875
TU864805 other upstream 477823 90396922 ~ 90400472 (+) True G760718
TU864778 other upstream 489218 90374087 ~ 90389077 (+) False G760718
TU865491 other downstream 74353 90952992 ~ 90955079 (+) False G761244
TU865499 other downstream 74353 90952992 ~ 90955079 (+) False G761244
TU865506 other downstream 74353 90952992 ~ 90955079 (+) False G761244
TU865509 other downstream 74353 90952992 ~ 90955079 (+) False G761244
TU865515 other downstream 74353 90952992 ~ 90955139 (+) False G761244

Expression Profile