RNA id: TU865588


Basic Information

Item Value
RNA id TU865588
length 986
RNA type TUCP
GC content 0.47
exon number 4
gene id G761291
representative False

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 91101319 ~ 91104154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACCTTCTAGATTACACTTTATTGGAATGCATACTCATGTTTAACACACAAGTAACTTTATCACTTTTACATTTATCCCAACATcaagaccagaggagaggaggagaccagaggagaagaaagagaccagaggagaagaaagagaccagaggagaagagaccagaggagaggagaagaggagaccagagaagaggagaccagaggagaagagaccagaggagaggagaccagaggagaagaggagaacagaccagaggagaagaggagaacagaccagaggagaggaggagagGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGACGAGACCAGAGGAGAcaagaccagaggagaggagaccagaggacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcagccagtaacacacacagtcaGCCAACTACATGTCTGTATGACCCAGACACCCAATAGGTTTCATACAGGGTTCAGGGGTTAAGAGTTCAGCTTCTGGCGGCCATGGCCTGTTGTCAGGGGTTAGAGTTCAGGTCCTAACGGCCACAGCctgttgctgctgctggtcaGATGACTGAAGCTGCTTCCCCAGGTACTCCCTGCAGAGGACAGGAGAACGTTCAATCACACACAATGTAGCTTCCAGGTACtccctggagaggagagggcagaggtcAATCAATAAGGCATTCTAAACGGAACAAAAACATGACATTTAAAttcctattttatttatttatttcacctttatttaaccaagtaggccacttgagaactagttctcatttacaactgagacctggccaagataaagcaaagcagtgcgacataaacaacaacacagtgttacacatggaataaacaaacatacagtcaataacaaaatagaaaagtctatatacagtgtgtgcaaatgaagtaaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU865607 lncRNA upstream 39328 91060052 ~ 91061991 (+) True G761300
TU865570 lncRNA upstream 60751 91007569 ~ 91040568 (+) False G761280
TU865564 lncRNA upstream 104099 90996431 ~ 90997220 (+) True G761275
TU865553 lncRNA upstream 114030 90984294 ~ 90987289 (+) False G761268
TU865550 lncRNA upstream 114030 90984585 ~ 90987289 (+) True G761268
TU865667 lncRNA downstream 86166 91190320 ~ 91201574 (+) True G761352
TU865699 lncRNA downstream 125438 91229592 ~ 91230793 (+) True G761375
TU865706 lncRNA downstream 139157 91243311 ~ 91244141 (+) True G761382
TU865709 lncRNA downstream 144096 91248250 ~ 91249100 (+) True G761385
TU865713 lncRNA downstream 148728 91252882 ~ 91253238 (+) True G761388
XM_036986792.1 mRNA upstream 184582 90913773 ~ 90916737 (+) True LOC110530903
XM_036986791.1 mRNA upstream 270794 90799988 ~ 90830525 (+) True LOC110530865
XM_021614155.2 mRNA upstream 304381 90779252 ~ 90796938 (+) True LOC110530867
XR_005053010.1 mRNA upstream 315618 90779123 ~ 90785701 (+) False LOC110530867
XM_036986786.1 mRNA upstream 358235 90737231 ~ 90743084 (+) False ndufb3
XM_036986799.1 mRNA downstream 135732 91239886 ~ 91260968 (+) True rgs20
TU865569 other upstream 60751 91019538 ~ 91040568 (+) True G761280
TU865504 other upstream 128756 90954264 ~ 90972563 (+) True G761244
TU865490 other upstream 139795 90954264 ~ 90961524 (+) False G761244
TU865515 other upstream 146180 90952992 ~ 90955139 (+) False G761244
TU865506 other upstream 146240 90952992 ~ 90955079 (+) False G761244
TU866166 other downstream 459919 91564073 ~ 91567098 (+) False G761750

Expression Profile