RNA id: TU865706


Basic Information

Item Value
RNA id TU865706
length 516
lncRNA type intronic
GC content 0.33
exon number 4
gene id G761382
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 91243311 ~ 91244141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacactcaggttggagtcattaacactagtttacatacacttaggttggagtcattaaaactagtttacatccactcaggttggagtcattaacactagtttacatccacttaggttggagtcattaaaactcgtttttcaaccactccacaaatgtattgttaacaaactaaagttttggcaagtcagttaggacatctactttgtgcataacacaagtaatttttccaacaattgtttgcagacagattatttcacttataaatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU865699 lncRNA upstream 12518 91229592 ~ 91230793 (+) True G761375
TU865667 lncRNA upstream 41737 91190320 ~ 91201574 (+) True G761352
TU865607 lncRNA upstream 181320 91060052 ~ 91061991 (+) True G761300
TU865570 lncRNA upstream 202743 91007569 ~ 91040568 (+) False G761280
TU865564 lncRNA upstream 246091 90996431 ~ 90997220 (+) True G761275
TU865709 lncRNA downstream 4109 91248250 ~ 91249100 (+) True G761385
TU865713 lncRNA downstream 8741 91252882 ~ 91253238 (+) True G761388
TU865634 lncRNA downstream 26240 91270381 ~ 91272914 (+) False G761324
TU865635 lncRNA downstream 26240 91270381 ~ 91272914 (+) False G761324
TU865636 lncRNA downstream 26240 91270381 ~ 91272914 (+) False G761324
XM_036986792.1 mRNA upstream 326574 90913773 ~ 90916737 (+) True LOC110530903
XM_036986791.1 mRNA upstream 412786 90799988 ~ 90830525 (+) True LOC110530865
XM_021614155.2 mRNA upstream 446373 90779252 ~ 90796938 (+) True LOC110530867
XR_005053010.1 mRNA upstream 457610 90779123 ~ 90785701 (+) False LOC110530867
XM_036986786.1 mRNA upstream 500227 90737231 ~ 90743084 (+) False ndufb3
TU865588 other upstream 139157 91101319 ~ 91104154 (+) False G761291
TU865585 other upstream 139502 91101569 ~ 91103809 (+) False G761291
TU865590 other upstream 139502 91101569 ~ 91103809 (+) False G761291
TU865591 other upstream 139502 91101569 ~ 91103809 (+) False G761291
TU865596 other upstream 139502 91101569 ~ 91103809 (+) True G761291
TU866166 other downstream 319932 91564073 ~ 91567098 (+) False G761750

Expression Profile