RNA id: TU866167


Basic Information

Item Value
RNA id TU866167
length 2681
lncRNA type antisense_over
GC content 0.44
exon number 4
gene id G761750
representative False

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 91564073 ~ 91567098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGTCCTCCTTTTATTGTACAACATGCAACATGACAACTGGTACAAGTTACTTTGGTTCAATTTTACATGTAATCAATTCCAACATTACAATAAGTTGTCTCGTTAATCTTAAAATGTtccctaaataaataaatattaatttgtttacaaaactATATACATTAAATATagtaaacaaaaacacacagtGTACTGTCCACTAACTATGACATGACATTGAGTGAACTTTCTTCATGCTTAGTCGTCATTGTGTCTGAACATCTGCTTGTACATCTCCAGGGCCTCCTGAGCGACGAAATTTATAAAGGCGGGGTCCTGCAGCTCCACACCAGCTGGAatggtcaggaggagaggaggagagtttaGGATGTTCAGCTCCACCTTGGTGTCTCCCCCTGACGAGCTGCCTCCATCAActccctctgacaccacctgggtaaaaaaaacaatgtGTTGTACTCTTACTGACACCACCTGGGTAGAATCAACAATAAATTGTGATCATGCTGAGAACACCTGGGTAGAAACAACATACTGTACTCATACTGACAACACCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGACACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACGCCACCTGGGTAGAAACAACAATATACTAACACCACCTGGGTAGAAACAACAATATACTGACAACACCTGGGTAGAAACAACAATATACTAACACCACCTGGGTAGAAACAACAATATACTGACAACACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAATCAACAATATACTGACGCCTCCTGGGTAGAAACAACAATATACTGACACTTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCACCTGggtaaaaacaacaaaatactgaCACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTAACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAAAATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCACCTGGGTCAAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATATACTGACACCACCTGGGTAGAAACAACAATTTACTGACACCACCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAACAATATACTGACACCTCCTGGGTAGAAACAATATGCTGTACTAATATTGACACCTCCTGGGTAGAAACAACAATATACTGACACCACAATATAAACCTTTCTCTAATAAGAGCATGTTGTTTTCAGGGATTTAAGCAAATGAATGCCTCGGTTATTCATTTAAGTTTTACGGTATGtacttactgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgacctttCTGATGCGGAATTTGGTATCAggtgtggtgttgttgttgacCATTTCTGTCACCCAGCTGAACTCAGTAGCCATGTTGCTTATCCAGCTCGCCGTGTCACCTGTGTGCTGCTGCACAATGCTCAGAACCTGGAGTAATGGATTAAACAGAACGGATGGTATGTTATCCTATGCTATGCTATGATACGGAATGCTACACAATGCTATGCTATGTTACCTCGTCGTACTGCTCCTTCGACATGTCCCGCAGCTGAGACACCTCATCCAGTTCCACATGCAGCTCCCGCACACTGGGACACTctgtgagctgcACCCCTTGGCAGGACTGACACTGGTTCTGCAGCTGCCAGCATTCTGAAGTCTGCCTCCTCAACTCTCTACACAACTTCCTGTTCTGGAGGAAATGAGGGAACAGCTCCCTCTctctcttcctctcctcctccacaacgTCTTTGAGGTCATCAAACACTCGTGTGACCACGTCCCCAAAGTCCTCCACAACACTCTTCCCAAAGTTAAAGAAGGAGTCCAGGACCTCCTCCATCCCCACTCTGTGGATGAAGCCCAAGTCCATCCCCAGGGAGAAGGGGTCCTGGGTAGGCTGTTGGCCCCGGGCTTGGCCTCTGCTCTGGGGGTCAAAGGCCTTCTGGAGGTTTTGGTCCAGTTTACCTTGCATCTTGTCCACCAGCACCACACTGCGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU866165 lncRNA upstream 661 91562830 ~ 91563412 (+) True G761749
TU866164 lncRNA upstream 5147 91558214 ~ 91558926 (+) True G761748
TU866163 lncRNA upstream 6449 91557419 ~ 91557624 (+) True G761747
TU866162 lncRNA upstream 6729 91557066 ~ 91557344 (+) True G761746
TU866133 lncRNA upstream 21430 91541826 ~ 91542643 (+) True G761717
TU866184 lncRNA downstream 14917 91582015 ~ 91596037 (+) True G761762
TU866186 lncRNA downstream 16775 91583873 ~ 91597881 (+) True G761763
TU866209 lncRNA downstream 34425 91601523 ~ 91602418 (+) True G761783
XM_036986799.1 mRNA upstream 303105 91239886 ~ 91260968 (+) True rgs20
XM_036986792.1 mRNA upstream 647336 90913773 ~ 90916737 (+) True LOC110530903
XM_036986791.1 mRNA upstream 733548 90799988 ~ 90830525 (+) True LOC110530865
XM_021614155.2 mRNA upstream 767135 90779252 ~ 90796938 (+) True LOC110530867
XR_005053010.1 mRNA upstream 778372 90779123 ~ 90785701 (+) False LOC110530867
TU865588 other upstream 459919 91101319 ~ 91104154 (+) False G761291
TU865585 other upstream 460264 91101569 ~ 91103809 (+) False G761291
TU865590 other upstream 460264 91101569 ~ 91103809 (+) False G761291
TU865591 other upstream 460264 91101569 ~ 91103809 (+) False G761291
TU865596 other upstream 460264 91101569 ~ 91103809 (+) True G761291

Expression Profile