RNA id: TU866186



Basic Information


Item Value
RNA id TU866186
length 383
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G761763
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 91583873 ~ 91597881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGTTTTGGGTGATAGTGACCAGTGgagttactcccttccaggatcgtaacgtttccagaggtatatcctccctagacagtgaatttgttcgtagtccaggtcaaacaagtggatcggttgtccaggctaagtacggcggggtaagggatcctcccaggggaattattccgtgggatccaattctccgccagacattatctgggcaccccagggattaCACGGCCAATGCGTCTGTTTTGTAGATTTGTGAACATATCAAAATACTTAAACCTACATGCAGAATACCTGCTGTTAACTTTTAAATGATTGGAatgaattagggttagggtgagggtggtGTGGGAACCATCAGCCCCAGAACCACACTCTATTCGCaaagtcag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU866167 lncRNA upstream 16775 91564073 ~ 91567098 (+) False G761750
TU866168 lncRNA upstream 16775 91564073 ~ 91567098 (+) True G761750
TU866165 lncRNA upstream 20461 91562830 ~ 91563412 (+) True G761749
TU866164 lncRNA upstream 24947 91558214 ~ 91558926 (+) True G761748
TU866163 lncRNA upstream 26249 91557419 ~ 91557624 (+) True G761747
TU866209 lncRNA downstream 3642 91601523 ~ 91602418 (+) True G761783
XM_036986799.1 mRNA upstream 322905 91239886 ~ 91260968 (+) True rgs20
XM_036986792.1 mRNA upstream 667136 90913773 ~ 90916737 (+) True LOC110530903
XM_036986791.1 mRNA upstream 753348 90799988 ~ 90830525 (+) True LOC110530865
XM_021614155.2 mRNA upstream 786935 90779252 ~ 90796938 (+) True LOC110530867
XR_005053010.1 mRNA upstream 798172 90779123 ~ 90785701 (+) False LOC110530867
TU866166 other upstream 16775 91564073 ~ 91567098 (+) False G761750
TU865590 other upstream 480064 91101569 ~ 91103809 (+) False G761291
TU865591 other upstream 480064 91101569 ~ 91103809 (+) False G761291
TU865596 other upstream 480064 91101569 ~ 91103809 (+) True G761291
TU865587 other upstream 481241 91101569 ~ 91102632 (+) False G761291

Expression Profile