RNA id: XM_036987087.1


Basic Information

Item Value
RNA id XM_036987087.1
length 1439
RNA type mRNA
GC content 0.49
exon number 12
gene id slc10a7
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 3636138 ~ 3663572 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGACGTCATCGTCAGTGCTGCTAGCAGAATATTAGTACGGATATGAAATCGTGTGTCTCTTTTATCCTTCTTCAAAAGTACAATCTGACAAAGTTTCTGTCGCTATTGGGGCTTGTCCGGACGGGACAGGGAAGTCAGGTTCGGCCCGGGGAGCCGTGTAGAGGCTCGGTAATATGGGCCTGTTGGCTAGAGTACGGAAAGAATGGTTTATTATCGGTATAGTGGCAGCGATCGTGTCTGCGAAACTACAGCCTGCAGTTGGACTGAAAGGAGgtccacTGAGACCAGAGTTCACAATCACCTATGTTGCGGTGTCAGCCATTTTCTTCAACAGCGGCCTGTCATTAAAAACAGAGGAGTTGACCAGTGCCCTCCTCCATGTGAAGCTGCATCTGTTTGTCCAGTCCTTCACCCTGGTCTTCTTCCCTGTTGCCATGTGGCTCTGTATCAAACTACTGGCTCTTACCTCAATCAACACTTGGCTACTCCGAGGGTTACAGACGGTGGGATGTATGCCTCCACCAGTCTCCTCTGCTGTCATACTCACCAAAGCTGTGGGGGGGAACGAGGCTGCCGCCATCTTTAACTCCGCCTTCGGAAGCTTCCTGGGAATACTAGTGACaccactgctactgttactgtttCTGGGCTCGTCATCCTCTGTTCctttctcctccatcttctctcaGCTCTTCATGACTGTGGTCGTTCCTCTCATCCTAGGGCAGGTGTCCCGGAGGTTCCTGAGGGACTGGCTCGAGAGGAGGAAACCTCCGTTTGGAGTCATCAGTTCTTTGGTTCTCCTGATGATCATTTATACCACCTTCTGTGAGACCTTCTCTAACCCGGATATTGAACTGGACCACCTCAGCCTGCTGCTCATCACCTTCATCATATTCTGCATCCAGCTGAGCTTCATGCTGTTGACGTTTGTCTTCTCCACACAGAAACAATCTGGTTTTACTCCAGCTGACACAGTAGCTATCATGTTCTGTGCTACACACAAATCTCTCACCCTGGgTATACCCATGTTAAAGATAGTTTTTGAGGGGTACGAGCATCTCTCTCTGatctccgtccctctcctcatctATCACCCTGCTCAGATCCTACTGGGTTCAATACTGGTACCCACCATCAAGAGCTGGATGAACAGCAGACAAAAGGGAGTGAAGTTGACCGACCTGCAGCCCATCTGAAGTGGACTCTCCCCAGTGTGTACACTCATTCACTCCCCCTCATGGGGAGTATCATTTGAACTGTGACAGAAGGGACTACTTCCTTCCTCTTTTATGTATCTCTCTGGTGGAAGGATACATACAGAAGCACAAGTGCCTCGTCGCAACCACGTGACTCGCGAACACGTAGTCCTGGGCTCTAACGGTTGTGATGGTCGCTATGACAAAACTTGTGTGATTTATTCGATGGTTTACTTTAAA

Function

GO: NA

KEGG:

id description
K14347 SLC10A7, P7; solute carrier family 10 (sodium/bile acid cotransporter), member 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU869782 lncRNA downstream 861 3634925 ~ 3635277 (-) True G764364
TU869814 lncRNA downstream 12206 3623204 ~ 3623932 (-) True G764385
TU869803 lncRNA downstream 33853 3601713 ~ 3602285 (-) True G764377
TU869798 lncRNA downstream 47201 3588056 ~ 3588937 (-) True G764372
TU869777 lncRNA downstream 56936 3576993 ~ 3579202 (-) True G764359
TU869845 lncRNA upstream 48251 3711823 ~ 3712025 (-) True G764413
TU869846 lncRNA upstream 48522 3712094 ~ 3713751 (-) False G764414
TU869848 lncRNA upstream 48764 3712336 ~ 3713751 (-) True G764414
TU869842 lncRNA upstream 60214 3723786 ~ 3725642 (-) True G764410
TU869866 lncRNA upstream 65292 3728864 ~ 3730197 (-) True G764427
XM_036989230.1 mRNA downstream 7798 3610148 ~ 3628340 (-) True LOC118966149
XM_036987086.1 mRNA downstream 25578 3587149 ~ 3610560 (-) True LOC110531324
XM_036987082.1 mRNA downstream 73438 3518711 ~ 3562700 (-) False otud4
XM_036987081.1 mRNA downstream 125579 3499621 ~ 3510559 (-) False anapc10
XM_036987089.1 mRNA upstream 3696 3667268 ~ 3699007 (-) False ttc29
XM_036987090.1 mRNA upstream 3696 3667268 ~ 3699007 (-) True ttc29
XM_036989231.1 mRNA upstream 73957 3737529 ~ 3739697 (-) False LOC118966150
XM_036987095.1 mRNA upstream 123360 3786932 ~ 3839877 (-) False LOC110532885
XM_036987096.1 mRNA upstream 123360 3786932 ~ 3839877 (-) False LOC110532885
TU869128 other downstream 337035 3296302 ~ 3299103 (-) True G763961
TU868794 other downstream 1149237 2473098 ~ 2486901 (-) False G763719
TU868793 other downstream 1149237 2475074 ~ 2486901 (-) True G763719
TU868630 other downstream 1657907 1962973 ~ 1978231 (-) False G763587
TU867066 other downstream 2771026 861374 ~ 865112 (-) False G762459
TU869858 other upstream 188399 3851971 ~ 3858893 (-) False LOC110498423
TU870731 other upstream 350262 4013834 ~ 4016409 (-) False LOC118966151
TU870733 other upstream 350262 4013834 ~ 4016409 (-) True LOC118966151
TU870833 other upstream 627223 4290795 ~ 4319826 (-) True G765059
TU870890 other upstream 782755 4446327 ~ 4536079 (-) False G765100

Expression Profile