Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU871200 |
| length | 377 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC110518233 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 4985812 ~ 5018523 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU871167 | lncRNA | downstream | 56646 | 4919263 ~ 4929340 (-) | True | G765292 |
| TU871174 | lncRNA | downstream | 62502 | 4922850 ~ 4923484 (-) | True | LOC110532986 |
| TU871175 | lncRNA | downstream | 63753 | 4921258 ~ 4922233 (-) | True | G765295 |
| TU871148 | lncRNA | downstream | 69947 | 4914970 ~ 4916039 (-) | True | G765280 |
| TU871155 | lncRNA | downstream | 75959 | 4900342 ~ 4910027 (-) | True | G765286 |
| TU871202 | lncRNA | upstream | 1281 | 5017272 ~ 5018456 (-) | True | LOC110518233 |
| TU871230 | lncRNA | upstream | 29544 | 5045535 ~ 5047502 (-) | True | G765343 |
| TU871269 | lncRNA | upstream | 130322 | 5146313 ~ 5146613 (-) | True | G765377 |
| TU871473 | lncRNA | upstream | 166149 | 5182140 ~ 5183023 (-) | True | G765529 |
| TU871474 | lncRNA | upstream | 166333 | 5182324 ~ 5214592 (-) | False | G765530 |
| XM_036987139.1 | mRNA | downstream | 52500 | 4923031 ~ 4933486 (-) | False | LOC110532986 |
| XM_036987138.1 | mRNA | downstream | 69530 | 4901886 ~ 4916456 (-) | True | LOC118965977 |
| XM_036987135.1 | mRNA | downstream | 85189 | 4879904 ~ 4900797 (-) | False | rbm46 |
| XM_036987136.1 | mRNA | downstream | 85189 | 4880182 ~ 4900797 (-) | True | rbm46 |
| XM_036987137.1 | mRNA | downstream | 106288 | 4875082 ~ 4879698 (-) | True | LOC118965976 |
| XM_036987150.1 | mRNA | upstream | 42038 | 5058029 ~ 5075839 (-) | True | LOC110532892 |
| XM_036987153.1 | mRNA | upstream | 178252 | 5194243 ~ 5241804 (-) | False | LOC110511386 |
| XM_036987156.1 | mRNA | upstream | 178252 | 5194243 ~ 5241804 (-) | False | LOC110511386 |
| XM_036987158.1 | mRNA | upstream | 178252 | 5194243 ~ 5241804 (-) | False | LOC110511386 |
| XM_036987157.1 | mRNA | upstream | 178252 | 5194243 ~ 5241805 (-) | False | LOC110511386 |
| TU870895 | other | downstream | 410114 | 4574845 ~ 4575872 (-) | True | LOC110515555 |
| TU870890 | other | downstream | 449907 | 4446327 ~ 4536079 (-) | False | G765100 |
| TU870887 | other | downstream | 518278 | 4466567 ~ 4467708 (-) | True | G765100 |
| TU870833 | other | downstream | 666160 | 4290795 ~ 4319826 (-) | True | G765059 |
| TU870733 | other | downstream | 969577 | 4013834 ~ 4016409 (-) | True | LOC118966151 |
| TU871235 | other | upstream | 39489 | 5055480 ~ 5057322 (-) | True | G765347 |
| TU871540 | other | upstream | 281485 | 5297476 ~ 5298437 (-) | True | G765579 |
| TU872873 | other | upstream | 1185378 | 6201369 ~ 6202730 (-) | False | G766599 |
| TU872875 | other | upstream | 1185378 | 6201369 ~ 6209209 (-) | False | G766599 |
| TU872926 | other | upstream | 1235606 | 6251597 ~ 6256628 (-) | True | G766640 |
