RNA id: XR_005053486.1



Basic Information


Item Value
RNA id XR_005053486.1
length 70
RNA type mRNA
GC content 0.43
exon number 1
gene id LOC118966220
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6359805 ~ 6359874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTAGAAGTGATGATTTCCTGTTACCGCCCCAGTCTGATGTTAAGCTGACTGATTGGTTACTGAACTGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU873006 lncRNA downstream 20159 6339029 ~ 6339646 (-) True G766688
TU873005 lncRNA downstream 20993 6338592 ~ 6338812 (-) True G766687
TU872997 lncRNA downstream 25770 6330903 ~ 6334035 (-) False G766682
TU873014 lncRNA upstream 9841 6369715 ~ 6369926 (-) True G766696
TU873015 lncRNA upstream 10366 6370240 ~ 6370475 (-) True G766697
TU873028 lncRNA upstream 19773 6379647 ~ 6388310 (-) True G766708
TU872982 lncRNA upstream 23271 6383145 ~ 6392089 (-) True G766670
TU873033 lncRNA upstream 28629 6388503 ~ 6397872 (-) True G766712
LOC118966224 mRNA downstream 1371 6358361 ~ 6358434 (-) True LOC118966224
XR_005053150.1 mRNA downstream 8597 6340576 ~ 6351208 (-) True LOC118936332
XR_005053152.1 mRNA downstream 8651 6340576 ~ 6351154 (-) False LOC118936332
XM_036987181.1 mRNA downstream 12731 6340576 ~ 6347074 (-) False LOC118936332
XM_036987182.1 mRNA downstream 12731 6340576 ~ 6347074 (-) False LOC118936332
XR_005053482.1 mRNA upstream 1054 6360928 ~ 6360997 (-) True LOC118966216
XR_005053489.1 mRNA upstream 1511 6361385 ~ 6361454 (-) True LOC118966229
XR_005053493.1 mRNA upstream 1848 6361722 ~ 6361848 (-) True LOC118966234
XR_005053478.1 mRNA upstream 2303 6362177 ~ 6362248 (-) True LOC118966212
XR_005053475.1 mRNA upstream 2631 6362505 ~ 6362568 (-) True LOC118966209
TU872926 other downstream 103177 6251597 ~ 6256628 (-) True G766640
TU872875 other downstream 150596 6201369 ~ 6209209 (-) False G766599
TU872873 other downstream 157075 6201369 ~ 6202730 (-) False G766599
TU871540 other downstream 1061368 5297476 ~ 5298437 (-) True G765579
TU871235 other downstream 1302483 5055480 ~ 5057322 (-) True G765347
TU873098 other upstream 97329 6457203 ~ 6464631 (-) True G766749
TU873212 other upstream 252205 6612079 ~ 6613412 (-) True G766850
TU873185 other upstream 512962 6872836 ~ 6882118 (-) True LOC110531366
TU873176 other upstream 605580 6965454 ~ 6969691 (-) True LOC110531380
TU873506 other upstream 885770 7245644 ~ 7251075 (-) True G767056