RNA id: XR_005053482.1



Basic Information


Item Value
RNA id XR_005053482.1
length 70
RNA type mRNA
GC content 0.43
exon number 1
gene id LOC118966216
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 6360928 ~ 6360997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGTAGAAGTGATGACTTCTTATTACCGCCCCAGTCTGATGTTACGCTGACTGATTGGTTACTGAACTGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU873006 lncRNA downstream 21282 6339029 ~ 6339646 (-) True G766688
TU873005 lncRNA downstream 22116 6338592 ~ 6338812 (-) True G766687
TU872997 lncRNA downstream 26893 6330903 ~ 6334035 (-) False G766682
TU873014 lncRNA upstream 8718 6369715 ~ 6369926 (-) True G766696
TU873015 lncRNA upstream 9243 6370240 ~ 6370475 (-) True G766697
TU873028 lncRNA upstream 18650 6379647 ~ 6388310 (-) True G766708
TU872982 lncRNA upstream 22148 6383145 ~ 6392089 (-) True G766670
TU873033 lncRNA upstream 27506 6388503 ~ 6397872 (-) True G766712
XR_005053486.1 mRNA downstream 1054 6359805 ~ 6359874 (-) True LOC118966220
LOC118966224 mRNA downstream 2494 6358361 ~ 6358434 (-) True LOC118966224
XR_005053150.1 mRNA downstream 9720 6340576 ~ 6351208 (-) True LOC118936332
XR_005053489.1 mRNA upstream 388 6361385 ~ 6361454 (-) True LOC118966229
XR_005053493.1 mRNA upstream 725 6361722 ~ 6361848 (-) True LOC118966234
XR_005053478.1 mRNA upstream 1180 6362177 ~ 6362248 (-) True LOC118966212
XR_005053475.1 mRNA upstream 1508 6362505 ~ 6362568 (-) True LOC118966209
XR_005053472.1 mRNA upstream 1992 6362989 ~ 6363052 (-) True LOC118966206
TU872926 other downstream 104300 6251597 ~ 6256628 (-) True G766640
TU872875 other downstream 151719 6201369 ~ 6209209 (-) False G766599
TU872873 other downstream 158198 6201369 ~ 6202730 (-) False G766599
TU871540 other downstream 1062491 5297476 ~ 5298437 (-) True G765579
TU871235 other downstream 1303606 5055480 ~ 5057322 (-) True G765347
TU873098 other upstream 96206 6457203 ~ 6464631 (-) True G766749
TU873212 other upstream 251082 6612079 ~ 6613412 (-) True G766850
TU873185 other upstream 511839 6872836 ~ 6882118 (-) True LOC110531366
TU873176 other upstream 604457 6965454 ~ 6969691 (-) True LOC110531380
TU873506 other upstream 884647 7245644 ~ 7251075 (-) True G767056