RNA id: XM_021614856.2


Basic Information

Item Value
RNA id XM_021614856.2
length 7822
RNA type mRNA
GC content 0.51
exon number 8
gene id rbm14b
representative False

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15438506 ~ 15454319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GATTGTGAAGAATCAGCATTCTGGTGGTGGCAGCCCCCAACCCCCTGACTTCCCCATTGGTGAAGCCTTCTAAAAAAACGGAAGCAGGCGCTACCATTTTGAAACACGGCACTGCTTAGCTCCACTATGGACAAGAGCAACACGGTGAAGCTCTTCGTGGGCAACCTGGCTCTAGACACCACCCAGGAGGAGCTGTCGGCCATCTTTGAGGCGTACGGCCAGGTGGTCAGTTGCAGCGTTCTCCGACAGTTCGCCTTCGTACACCTACAGGGTGAGGGTGCTGCGGAGCGGGCCATCAGGGAGCTGAACGGCAGGGAGTTCCGGGGGAGGAACCTGGTGGTGGAGGAGTCCCGGGGCAGACCGCTCCACTCCACCAAGGTGTTTGTGGGGAACCTGTCGGGCATGTGCACCACCGAGGACCTCCAGGAGCTCTTCCAGACCTTTGGTAAAGTGCTGGAGTGCGACAAAGTCAAAGCCAGGCTCTCCTCTTCTGCAGGCTACGCCTTCGTGCACATGGAGAACAAGGAGGAGGCTCTTCAGGCCATCGAGGCCCTCCACGGCACCTCCTTCAAGGGACGCCCGCTCTCCGTGGAACTCTCCAAGGTGCAGCCCTCCAAGCAGACCCCGACGGGGAAGATCCCCTGTGTGAGCTGTGGGAAGCAGGGCCACTATGCCGGGGAGTGCCCTGTAGGGAAGTCCTCTCTGGAACAGTACCAGAGCCAGGCAGCTGTGTTAGCTGCAGCTGCCGCCGCCGCAGCCGGCCTGCCCCTCCAGGTCCAGCAAAGCGTCCACAACTCTGTCTACAACACCTCGACCTTTGACCCCACCTACGCGGCGTTGACGGGCCTCACCACCGGCACGCGGGCGGAAGGAAACCCCGTCAACCAGGCGGTGTATGGTGCCCTGGCAACGCAGGTCTACGGCGCTAACGTGGCCAATCAGCTCTATGGGGTCCAGGCAGCCAATCAGGCGGCAGCGTTGACGCAGGCGGGCGCCACGCAGGTGTACGCCAGCTCCATGAACCCCAGCCACGCCGCTCTCTACGGTCAGCTCAGTCAGATTGCCGCCAGCCCCGCCGCAGCATCCGCTGCCGCTGCCTACTCCACGCCAGTTTACGCGCATGCCATGGCTAACCACCACCACCCGGGGGCCATCTACCTGGCTGCACCTGGCGTAGAGATGCCTGCGGCCGCCGCAGCAGTCAACCAGGCCTACGCCATGGCGCCGGCGCTCTATGGGGGCGCCCAGCATGCCTACGGCCACTTGGGGATGGGTGCCGCCATGAGCGCATCGGCAGACCCGTCGGCGGCCATCTTTGAAGCGGCGAGGGTTCAGCACTACTTCGCCCAGGGACAGCAGGTTCTGGCCGAGCAGCAGAACGCGGCGGCAGTGGCTGCGGCACAAGCGGCAAAGTCTGGAGAGCGGGACCGGAGTCCCCTGAGGCGCTCTGCGGGGTCCCTGCTGCCCGATCCCGTCATGAAGCCCTTCATGTACCAGAGAGCCCCCAAACAGCGCCGGCCGCTGCTCCCCACCCCCGCCGGGCGAGCTGCAGAGGAAGCAGCGGAGGCTGGAGAGGACCCCATGGCTAGAGAGCAGTGCCAACAGTACGCTGAATACAACCACCAGCAGTACCAGCAGCTCCAGCACTTACAAGAGCAGTACCAACAGTATGCTGAGTACTACCACCAGCAGCACCAACAGCACCAGCAGCTCCAGCAGCTACAgtaCTATGCAGAGTACTACCAGCAGTACCAGCAGTACCAGCAACTCCAGCAGTACCAGCAACTCCAACAGTACCAGCAACTCCAACAGCTCCAGTACGCCTACCCGCCTCCCAACCACCACGCCATGGCTGCCATCCCTGCCCACGCCATGGCGGGCCACGCCCACCACCACGGCCAACCGGCCCACGTCACGGCGCTGGACGCCGCCCTCAGGCCAGTGGTGCCCGCCGCCGCCATGGTGGCAGCGCCCAGAGTGTATGAGCCGCCGCTGCCGCCGCCACCGAACCGCAAGGAGGCCGTCCTCCGCCGAGCCCCCGAACTCTCCCTTCACACGCCTGAGCCCCCCTTCAGATAGTCACCTCCCTCGTACCCCTCCTCTGTTTCCCCCCCGCCTACCACTGTATACCACCCTCGTACCCCTCCTCACTCTCAgcggctgtgtgtgtctgtgtatatctgtgtgtgtgggtatatgtgtgtgtactgtggcggtggggatgtgtgtgtgtgagagtgtgtttggAGTTTAGGAGTTGTCCTTTGACTACAGTAAAAACCCAACCCCAACTTGGTCCTGGTACCACACTAACAGTGCAGTTAAAGAAGGGAAGACATTCTGTCATCTTACCACCACACAATGTTTAGCTATTGACTCTCTCAATGGTAGACAGGTGCCAGTAGCAGACAGTCAATGCCTTCAACATAGAGATGAGGTCAAAAATATCACAACCGATTCTTGTACAGTCTGCGCTGTGGTGTGTTGCGTAGCTCCAGGGTTGGAGGGGTCTGTGTGTCTTGTACGCGTCGGGACTGtggtgcgagtgtgtgtgtgggagtgggaGAGTGACGTTGGCTTTCTGTTGTTACGATGTaatacacacactcccacacgtGCTGCCTTGTTCCCTCATGAGCTCACCCCGGGGAGATTCGAGGAACATAGGCACACTGTACTATATGAAACTACCCTCTACCTCTCCaaccccctccttccctcacaCCGCTGTAACCCCAACACTGAAAGACACTGCTGCATTTCTGCCCGTATTTACTCTGTCTATACCTTAGCCTGGGTAAACCAAATGAGATGCCGGGATCACCACGGGAACAGTAGAGAGTTTAACATTCAGTCTCTCTATACCTACCTCTGACAATGAGAGCACTGAGGTTAGCTGGTTAGAATATGAATGGTCTGCCTTCTATCCATACATTTTATCAGCCAGTGTCAGTTGCAGGGTTGGGGGTCCATTTTAATCAAATTCAGCTTAATTTAAAGTGGAATTGACCCCATCCCTGGTCAATAGTTTGGAGAAGAATGACACGTTTTAGGGACAACGTTTTCTATGTACTGTACTACTAGAGTCTTACTGCATCAGTGCATCTTGAGAGGCCTTTTAAAGTATGAAATATTTGAGCTTAGTTTTTTTTGTAATGTAAGTGGTTGTCGGGTCGATGAAGAGTACATTCTAACCCCTCAGATCAAGTATGAATTATTTTATGGATTTATAAGTAAGTTAACTTTTTAGACTTGCTAGAGAATCATGAGTTTCAATGAggtttaaaggaaaactccacccaaaaactatattttggtgtTTGTTTCATGAATCCATTTTCAacgatatgtaactttcaaaatacaggtCATCCCTGTATGATCCATTTAGCATCATATGATGCGGcgttttgaaagttacatatctcgattgctgacaagcaaaacattttgggactatgtcaacagcggactaatgaaacaaacacCAAAATGTTGTTTTTGGGTGGGAATTCCCCTTTAACGTTGTGCCTAAGCTTTGTGTGAAGTGCGAATAGCGGAGGGAAGAACTCCTTTTTAAGGGGCTTTTTTCCCCCTTACATGTCAGTCTCTTTAATCTGCGATGGAGGGAAAGGGGTTAGGATAATGTGGTGCGGTAACGTTCACACCGATGATGATATGGTGATGAGAGATGGAGCAGTATCTTTCAGTCTCCCTGTTCCGACGTATCCTTGCACCCCGCTGTAAGACGACTCACTACCCCCGTAACCCGCtgtgtccttcctcttctccctgtgATTTTAGTGACTTACTATTTTATCTTGCATataatctctctgtctcacacacacacacacacacccacacacacacacaccaagtttcGTCTGTGGGATCTCGACGATCAGGAAAAAAAACACCCTTTCTTGTTATGCTTGTTGCTTGCCTTGTTTCTGACCGTATTTTTAGAACTATTTaaaatatttctttttttttaacaaaaaggAAAAAGGCATGCTTTTTAATATGTATACTACACATACCcagcatttaaaaaataaagaatgtTTCTGACTACTGTGAGGAAAAGAAAAAACTGCGTTTCGGATGTATTTCCCCGTTCTTGTTTTTCCGTCGTCTTTTTGTACTCCTTCCCGTCTCTCCTTCCTTGTTGTAATGACCAGACCCATATCTAGTCTGGCTCGTGGATGGGGTAAGTCTGGTCTGGGGTCAGCgctcctctctccagcctcaCCCAAACTCTAGGCCTATAGCGCAGTCAGACAGACCCTGGGTGCGTGCcaataatatatattttctcCTCAACTGTGCACTTGTTCACATCCCTTTACTGTTGCGAGAGGAAATGACTGAAATGAGGATGTTTTTATGGTGCCAACTCCTAGGCCAGTtgtattcaactctgaccctacgaggtccggatcCTGCTTGTGTTCTattctacctgatcattaattgcacccgcctggtgtcccaggtctaaatcaggcttTGACATCCAGAGTTAAGTTTGAGGGTTCTAGGCCATGTCTCTGCTAATCCTATGTCTTTAACATATGTGGGAAGTTGTGAACAAGTGTATACTTCAGGAGGAAAGAGACCTGGGACAATACCCCTCACAGGTACATCAACAAGGCATCTACTGTGTTACCCTGCTGTTACCATGCGCTCATGTCTGAAAACAGCTTCCGTCACCTCTGATCTTTTTGATTTCCACTTCGTGCCAAACTAGTGTCGATTTCATGCCATTTTAATTGCAGAGTCAATGTTGAGTAGAGTGGCGCGCAATACTTGCTTGCAGATGACTCCTTGTTTTAACAATGGGTGGACAAACACAAACATCAGAGACCTGGGGAGAGGCACACAGATAGAATGACTGTGGGGGGGTTGCTGTGTGTCTGCTCCTACCCAACAACCTCACCACCAACACCATGTGTCTGTCTCTGCTGTGTTAGATGTGCATGTCACTCTGCTCTCTGTCCAAAGCCTCGTACATACTGACCTACTATTCCAACTGAAATAGGTACCGGCCGCCCAGACACCACCCAGCAGGTGTGAGGTGAGAGGGGGAAGACAATAAACGTCGCGCAGGCAAATGGGAAGTGGGAACTCAATCTTCTCCACCAAGGTAATGAAACAGCACTGTCCCCCTCTCTGACTGTGCCTTGACCGaaacacccctcccccctcctcgtCCGCCATCaccaccccaccccccctctgTAGCTCCCCTCACCTGCGTTGACATTGCCCGGGGGGCTTCTTTTGGGGGTCACTGCTCACGCTGTGATGTCTTCTACCAGACTTCCAGTGACTTGTCCTGTCTCTCACCATGCAGCACCTACAGTGACTGggctgtcagtctctctctgtcgtgctgatgtgtgtctgagagagactgtgtgtgtgtgtgtgtgactgactgtgactACATGTTTGAGAGCCAGAGACCGTGTGTGTAGTttaaagagtgagtgagtgtgtcactGAATCTCCgtgtctgagagtgtgtgtgtgtgatgtcattggTGTTTTGAGGCTTGGTACATGTGGATCCCCCGCCCCCGCTAGTGACTCCTACACCGCCGTATTCGCCGCCCCTCCCCCCAACCCATCCCCCTCTGCGCCTGTCCGCCGTACACAGCTTGCTGCCGCCGCCGCCTGCCGCCATCTTGGATCTAGGCTGGGCTCTGTGGATCAGCAGCCCCCGACTGGCCACACCCACCCCTGGCTATGGCTATAACCATAGAGACCTAGTGAATGACAATGGACACCGTGTATGGTGGCCTAGTGGGGTCACACGGCTGGACAGAGTATAAACTCATCAGAGACTTTGTAGGGCGAGAGTTTTTTTGCTTTGCTAAAACTGTGATGCTGGGTTTGCCATGGCTGTGTATGGGAGTTTAATCACTATTCACCACCTCCTTGCAGTTGAATGACTCAAGTCAAACTTATCTAATTAAATCCGATAAACTGACCTTGCTCTGGAGGATAACATTTGGAATAGGTTTTTTAACAGCGAGTTCCCTATGGCCCTCTCGCCCTATCAAAAACGTCCTATAAGACAGACCGGCCCAGTAAGGGCCCAACTACCTGCAGATTCACTGTAATCTCAGGACTCCTATAGGACTTCTTTGGTATGGGGACTATTTCTCTCGAGGTAGCTTCTGTCCCTACACCAACCCTCTGTACCTGTGGGTTGCAATGCGTGTATCTGAATCTCCTCCTCCTGTTGAGATGattgaatacacacacacccactcatctGAGGTGTCCGGCATGTGGTCTGAACAGCTGAGTAGTGCATTGCCCGTGGGGGGCAGAGACGAGAGTCCCCACTCTGTCTTATGAATGAAGTTAaggaaaggatggatggatggaaggaaggtGAGTTGGTAATGTAGGGATCTCCAGCTCTGATCCATCCCTGTTCCCTAACTCTTCTATCCTGACCATGGGGGGCCCTACACGAAAGTCATAAACACTGGTGCTGCACAAAATAAACTCAGTAGTCTACCACTGCACCAGATGGTTTTTGATGCGTTTTGGGGGGTAATCGATACAAATCCCCCCTTAAGGTTCACCAAAATACAACTGATTCTTCGATCTCCATGATCAGGATGTGATGCTCTTTCCCACACAGTCACCTCTCACTGACCTGGATGTGTGGAGTCTGACTCTCTCTGGTGTTTGAGTAAATGTAGCCAGCCATGAAGTTCTCCTGGTCTGCTCCCTATTGGCTCACACTGACTGACAACCTCATggctgctccctctctcttcacagcACAGGACAGGGAAGCCATCAATGCTGCCTTACACATAGAAACTCAAAGTATACCATGTCTCCAATACCAATCCCATGGTTTTAAATCCTCACGGAGTGAACGAGTGCACATTTCAAAGGGAGGGGACAGAATTGGAATTGGGCCACAGTTTTGCGCCCTGGGTCGACACCCAAGTCTACTGTCGTTCACACTTAATAACGTTGTTGCCTAAATGCTACCTAGTCACATCAAATATTATATTCTCACAATCAAGAACTTACTTGTAACTATGCTGTAACTAAGTTGACTTAATTGAGAATCTGGGCCCAGTCAAGTGAGGTTACAGTGTAATGGTGTGTGATTACATGTGGTTAGGGAAGAAGCTATATATAGACTTACAGTATAAAGGCAGCTTGATGTAGTGCTAGCTCTTATTGTTATCTAATACCTATGATCTTACTCTGAGGCCTTTCATTTCTCTTGGTGTTGGAGGAGACATTTTTAGGGAGAAAGAGCATCTTTGTACACCAAACTGGATTGTTGTGGTGATGTTTTGCAATGGATCGATGTTGAGTCATTTATTACTTTAAGCACATTTATAGgaaaaactaaaacaaagaatCAGCATGCTTGACGGAGATGAAGGGGGACATTTCCACGGTGCAAAATGGTTCACATCTGTCAAAAGAAAAACCCTAAAACTCATTATAATCTGGCAGTGTGATTTTAATTTGACATTGTTCTTCAATGTGCGTTATAAGAAAGTGCATAAACTAGTTTACTATACTAAGCAAGGCATGAACAGTGGCCTTTTTATAACGCGCATTGCTGAATAAGTGTCCAATTAAATCACACTTCCAGATGATGAGTTTTAAAGGATTTTTGCACCATGAAAATGTTGCCCATAATGTATTATGACTAATGAATAACCCCAATTGACTATAATGTATACTCCCTTTCTCCTTGCCTTGCTTATGTCTTGAGGCACTGTACCGTCTGCATGGCATTCCCAAATAAATGAGTTTTTGAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU882789 lncRNA downstream 29798 15405502 ~ 15408709 (-) True G774728
TU882738 lncRNA downstream 130690 15306350 ~ 15307817 (-) True G774683
TU882735 lncRNA downstream 152589 15284319 ~ 15285918 (-) True G774681
TU882726 lncRNA downstream 169208 15269030 ~ 15269299 (-) True G774675
TU882724 lncRNA downstream 188207 15249229 ~ 15250300 (-) True G774673
TU882833 lncRNA upstream 53014 15507332 ~ 15507668 (-) True G774767
TU882781 lncRNA upstream 105139 15559457 ~ 15561311 (-) True G774720
TU882877 lncRNA upstream 128695 15583013 ~ 15583220 (-) True G774807
TU882885 lncRNA upstream 138343 15592661 ~ 15592872 (-) True G774815
TU882888 lncRNA upstream 146548 15600866 ~ 15601141 (-) True G774818
XM_036987416.1 mRNA downstream 1805 15379329 ~ 15436702 (-) True LOC110531568
XM_036987411.1 mRNA downstream 117477 15285883 ~ 15321030 (-) True LOC110531570
XM_036987413.1 mRNA downstream 124012 15285883 ~ 15314495 (-) False LOC110531570
XM_021614864.2 mRNA upstream 92 15454410 ~ 15462353 (-) True LOC110531589
XR_005053190.1 mRNA upstream 99156 15553474 ~ 15569492 (-) False LOC110531592
XM_021614867.2 mRNA upstream 108298 15562616 ~ 15569492 (-) True LOC110531592
XM_021614868.2 mRNA upstream 115317 15569635 ~ 15578714 (-) False LOC110531593
XM_021614869.2 mRNA upstream 115317 15569635 ~ 15578714 (-) True LOC110531593
TU882761 other downstream 77188 15352307 ~ 15361319 (-) True G774702
TU882572 other downstream 184534 15238058 ~ 15253973 (-) True G774562
TU882399 other downstream 713985 14724054 ~ 14724522 (-) True G774427
TU882202 other downstream 1184350 14249401 ~ 14254157 (-) True LOC118966145
TU881137 other downstream 1450925 13980328 ~ 13987582 (-) True LOC110531538
TU883038 other upstream 170884 15625202 ~ 15625920 (-) True G774954
TU883145 other upstream 328039 15782357 ~ 15787606 (-) False LOC110531603
TU883264 other upstream 408002 15862320 ~ 15863834 (-) True G775139
TU883736 other upstream 458518 15912836 ~ 15913294 (-) True G775532
TU884559 other upstream 1372735 16827053 ~ 16828523 (-) False LOC110531626

Expression Profile