Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021614893.2 |
| length | 1236 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC110531606 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 15801982 ~ 15804621 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0042119 | neutrophil activation | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0030593 | neutrophil chemotaxis | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005153 | interleukin-8 receptor binding | molecular_function |
| GO:0008009 | chemokine activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU883161 | lncRNA | downstream | 1806 | 15799895 ~ 15800176 (-) | True | G775062 |
| TU883155 | lncRNA | downstream | 7008 | 15794514 ~ 15794974 (-) | True | G775056 |
| TU883153 | lncRNA | downstream | 7976 | 15793471 ~ 15794006 (-) | True | G775054 |
| TU883152 | lncRNA | downstream | 8631 | 15792846 ~ 15793351 (-) | True | G775053 |
| TU883149 | lncRNA | downstream | 10243 | 15789611 ~ 15791739 (-) | True | G775050 |
| TU883211 | lncRNA | upstream | 5542 | 15810163 ~ 15823389 (-) | False | G775095 |
| TU883209 | lncRNA | upstream | 7326 | 15811947 ~ 15823389 (-) | False | G775095 |
| TU883206 | lncRNA | upstream | 15520 | 15820141 ~ 15823389 (-) | True | G775095 |
| TU883220 | lncRNA | upstream | 21969 | 15826590 ~ 15826845 (-) | True | G775104 |
| TU883221 | lncRNA | upstream | 23623 | 15828244 ~ 15828548 (-) | True | G775105 |
| XM_021614892.2 | mRNA | downstream | 14316 | 15781909 ~ 15787666 (-) | False | LOC110531603 |
| XR_005053464.1 | mRNA | downstream | 58432 | 15743342 ~ 15743550 (-) | True | LOC118966198 |
| XM_021614887.2 | mRNA | downstream | 61129 | 15697822 ~ 15740853 (-) | False | intu |
| XM_021614888.2 | mRNA | downstream | 61129 | 15697822 ~ 15740853 (-) | True | intu |
| XM_021614884.2 | mRNA | downstream | 62202 | 15697822 ~ 15739780 (-) | False | intu |
| XM_036989276.1 | mRNA | upstream | 5530 | 15810151 ~ 15813197 (-) | True | LOC118966175 |
| NM_001124562.1 | mRNA | upstream | 15790 | 15820411 ~ 15823218 (-) | True | cxcd2 |
| XM_036987430.1 | mRNA | upstream | 49596 | 15854217 ~ 15857206 (-) | False | LOC118966003 |
| XM_036987431.1 | mRNA | upstream | 63285 | 15867906 ~ 15891269 (-) | False | LOC110532935 |
| XM_021614897.2 | mRNA | upstream | 147307 | 15951928 ~ 15979801 (-) | True | LOC110531609 |
| TU883145 | other | downstream | 14376 | 15782357 ~ 15787606 (-) | False | LOC110531603 |
| TU883038 | other | downstream | 176062 | 15625202 ~ 15625920 (-) | True | G774954 |
| TU882761 | other | downstream | 440663 | 15352307 ~ 15361319 (-) | True | G774702 |
| TU882572 | other | downstream | 548009 | 15238058 ~ 15253973 (-) | True | G774562 |
| TU882399 | other | downstream | 1077460 | 14724054 ~ 14724522 (-) | True | G774427 |
| TU883264 | other | upstream | 57699 | 15862320 ~ 15863834 (-) | True | G775139 |
| TU883736 | other | upstream | 108215 | 15912836 ~ 15913294 (-) | True | G775532 |
| TU884559 | other | upstream | 1022432 | 16827053 ~ 16828523 (-) | False | LOC110531626 |
| TU884558 | other | upstream | 1022553 | 16827174 ~ 16828561 (-) | False | LOC110531626 |
| TU884560 | other | upstream | 1022553 | 16827174 ~ 16828523 (-) | True | LOC110531626 |
