RNA id: trnav-uac-14



Basic Information


Item Value
RNA id trnav-uac-14
length 73
RNA type mRNA
GC content 0.51
exon number 1
gene id trnav-uac-14
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16120964 ~ 16121036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGTTccatagtgtagtggttatcacgtctGCTTTACACGCAGAAGGTCCTGGGTTCGAGCCCCAGTAGAACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU883377 lncRNA upstream 74782 16045606 ~ 16046182 (+) True G775236
TU883373 lncRNA upstream 78337 16042162 ~ 16042627 (+) True G775234
TU883370 lncRNA upstream 83574 16037084 ~ 16037390 (+) True G775231
TU883367 lncRNA upstream 90475 16030245 ~ 16030489 (+) True G775228
TU883366 lncRNA upstream 90996 16029674 ~ 16029968 (+) True G775227
TU883433 lncRNA downstream 10688 16131724 ~ 16132203 (+) True G775290
TU883434 lncRNA downstream 11423 16132459 ~ 16132667 (+) True G775291
TU883437 lncRNA downstream 14561 16135597 ~ 16135829 (+) True G775294
TU883439 lncRNA downstream 15612 16136648 ~ 16136992 (+) True G775296
TU883441 lncRNA downstream 29089 16150125 ~ 16150593 (+) True G775298
XM_021614890.2 mRNA upstream 423141 15692085 ~ 15697823 (+) False ino80b
XM_021614891.2 mRNA upstream 423146 15692086 ~ 15697818 (+) True ino80b
XM_021614872.2 mRNA upstream 460870 15629032 ~ 15660094 (+) False clcn3
XM_021614879.2 mRNA upstream 460870 15629032 ~ 15660094 (+) False clcn3
XM_036987422.1 mRNA upstream 466457 15629032 ~ 15654507 (+) False clcn3
trnav-uac-15 mRNA downstream 8694 16129730 ~ 16129802 (+) True trnav-uac-15
trnak-cuu-3 mRNA downstream 11768 16132804 ~ 16132876 (+) True trnak-cuu-3
trnan-guu-4 mRNA downstream 13261 16134297 ~ 16134370 (+) True trnan-guu-4
trnan-guu-5 mRNA downstream 22464 16143500 ~ 16143573 (+) True trnan-guu-5
trnan-guu-6 mRNA downstream 27625 16148661 ~ 16148734 (+) True trnan-guu-6
TU883269 other upstream 254256 15866089 ~ 15866708 (+) True G775142
TU881932 other upstream 619888 15471507 ~ 15501076 (+) False LOC110531590
TU881976 other upstream 655340 15465360 ~ 15465624 (+) True G774065
TU881923 other upstream 743776 15375224 ~ 15377188 (+) True G774021
TU881866 other upstream 821750 15298458 ~ 15299214 (+) True G773983
TU883454 other downstream 65240 16186276 ~ 16187450 (+) True G775306
TU883480 other downstream 116338 16237374 ~ 16239534 (+) False LOC110532936
TU883479 other downstream 116419 16237455 ~ 16239534 (+) False LOC110532936
TU883488 other downstream 116419 16237455 ~ 16239758 (+) False LOC110532936
TU883487 other downstream 127694 16248730 ~ 16250864 (+) True LOC110532936

Expression Profile