Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU889162 |
| length | 1279 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC110531717 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 20302051 ~ 20324316 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0021535 | cell migration in hindbrain | biological_process |
| GO:0036342 | post-anal tail morphogenesis | biological_process |
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0060028 | convergent extension involved in axis elongation | biological_process |
| GO:0005819 | spindle | cellular_component |
| GO:0005938 | cell cortex | cellular_component |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU889154 | lncRNA | downstream | 96958 | 20204839 ~ 20205120 (-) | True | G780409 |
| TU889152 | lncRNA | downstream | 98652 | 20203201 ~ 20203426 (-) | True | G780407 |
| TU889124 | lncRNA | downstream | 151900 | 20136510 ~ 20150178 (-) | True | G780379 |
| TU889118 | lncRNA | downstream | 182995 | 20118846 ~ 20119083 (-) | True | G780374 |
| TU889117 | lncRNA | downstream | 191293 | 20110578 ~ 20110785 (-) | True | G780373 |
| TU889255 | lncRNA | upstream | 21672 | 20325052 ~ 20325204 (-) | False | si:ch73-335l21.2 |
| TU889256 | lncRNA | upstream | 23089 | 20326469 ~ 20326689 (-) | True | si:ch73-335l21.2 |
| TU889275 | lncRNA | upstream | 54704 | 20358084 ~ 20358608 (-) | True | G780515 |
| TU889286 | lncRNA | upstream | 76719 | 20380099 ~ 20380659 (-) | True | G780525 |
| TU889299 | lncRNA | upstream | 105148 | 20408528 ~ 20408789 (-) | True | G780537 |
| XM_036987542.1 | mRNA | downstream | 47850 | 20247488 ~ 20254228 (-) | True | ponzr1 |
| XM_036987539.1 | mRNA | downstream | 63217 | 20219010 ~ 20238861 (-) | True | LOC110531713 |
| XM_036987535.1 | mRNA | downstream | 133492 | 20151667 ~ 20168586 (-) | False | LOC110531711 |
| XM_036987536.1 | mRNA | downstream | 133492 | 20151667 ~ 20168586 (-) | True | LOC110531711 |
| XM_021615040.2 | mRNA | downstream | 166574 | 20132002 ~ 20135504 (-) | True | fis1 |
| XM_036987546.1 | mRNA | upstream | 21037 | 20324417 ~ 20326497 (-) | False | si:ch73-335l21.2 |
| XM_021615051.2 | mRNA | upstream | 48023 | 20351403 ~ 20407407 (-) | False | si:ch73-335l21.1 |
| XM_036987547.1 | mRNA | upstream | 48023 | 20351403 ~ 20407410 (-) | False | si:ch73-335l21.1 |
| XM_036987548.1 | mRNA | upstream | 79680 | 20383060 ~ 20407410 (-) | True | si:ch73-335l21.1 |
| XM_036987552.1 | mRNA | upstream | 107424 | 20410804 ~ 20421616 (-) | False | agfg2 |
| TU889016 | other | downstream | 226626 | 20071996 ~ 20075452 (-) | True | LOC110531704 |
| TU888932 | other | downstream | 477507 | 19817691 ~ 19824571 (-) | True | G780209 |
| TU886754 | other | downstream | 1943975 | 18355441 ~ 18358103 (-) | True | G778216 |
| TU885197 | other | downstream | 2641595 | 17659690 ~ 17660483 (-) | False | G776822 |
| TU889401 | other | upstream | 627580 | 20930960 ~ 20933147 (-) | True | LOC110531730 |
| TU890849 | other | upstream | 1472338 | 21775718 ~ 21776210 (-) | True | G782003 |
| TU893578 | other | upstream | 3433841 | 23737221 ~ 23739513 (-) | True | G784602 |
| TU893641 | other | upstream | 3497403 | 23800783 ~ 23801684 (-) | True | G784652 |
| TU893640 | other | upstream | 3503178 | 23806558 ~ 23808272 (-) | True | G784651 |
