Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU888194 |
| length | 1080 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | acap1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 20418692 ~ 20455030 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU888187 | lncRNA | upstream | 43935 | 20409215 ~ 20409877 (+) | True | G779520 |
| TU888140 | lncRNA | upstream | 101075 | 20338526 ~ 20352737 (+) | True | G779478 |
| TU888123 | lncRNA | upstream | 125340 | 20328248 ~ 20328472 (+) | True | G779469 |
| TU888117 | lncRNA | upstream | 128778 | 20324497 ~ 20325034 (+) | True | G779465 |
| TU888091 | lncRNA | upstream | 150249 | 20302053 ~ 20303563 (+) | False | G779446 |
| TU888237 | lncRNA | downstream | 27467 | 20482497 ~ 20482703 (+) | True | G779563 |
| TU888248 | lncRNA | downstream | 40847 | 20495877 ~ 20496206 (+) | True | G779574 |
| TU888250 | lncRNA | downstream | 42481 | 20497511 ~ 20497775 (+) | True | G779576 |
| TU888260 | lncRNA | downstream | 53402 | 20508432 ~ 20510614 (+) | False | G779584 |
| TU888261 | lncRNA | downstream | 53402 | 20508432 ~ 20510614 (+) | True | G779584 |
| XM_021615049.2 | mRNA | upstream | 112080 | 20336421 ~ 20341732 (+) | True | LOC110531718 |
| XM_021615050.2 | mRNA | upstream | 117648 | 20334503 ~ 20336164 (+) | True | si:ch73-335l21.4 |
| XM_021615047.2 | mRNA | upstream | 170827 | 20280074 ~ 20282985 (+) | True | LOC110531716 |
| XM_036987541.1 | mRNA | upstream | 206640 | 20239757 ~ 20247172 (+) | True | LOC110532972 |
| XM_036987538.1 | mRNA | upstream | 242574 | 20189830 ~ 20211238 (+) | False | LOC110531712 |
| XM_021615069.2 | mRNA | downstream | 76915 | 20531945 ~ 20539559 (+) | False | trip6 |
| XM_021615067.2 | mRNA | downstream | 77077 | 20532107 ~ 20539559 (+) | False | trip6 |
| XM_021615066.2 | mRNA | downstream | 77175 | 20532205 ~ 20539559 (+) | False | trip6 |
| XM_021615068.2 | mRNA | downstream | 77175 | 20532205 ~ 20539559 (+) | True | trip6 |
| XM_036987554.1 | mRNA | downstream | 85886 | 20540916 ~ 20550011 (+) | False | LOC118936359 |
| TU887946 | other | upstream | 371758 | 20079436 ~ 20082054 (+) | True | LOC110531706 |
| TU887922 | other | upstream | 413529 | 20039611 ~ 20040283 (+) | True | G779291 |
| TU887902 | other | upstream | 430344 | 20009516 ~ 20023468 (+) | False | LOC110531703 |
| TU887900 | other | upstream | 431776 | 20009516 ~ 20022036 (+) | False | LOC110531703 |
| TU887801 | other | upstream | 561365 | 19876268 ~ 19892447 (+) | True | LOC110531697 |
| TU888672 | other | downstream | 646549 | 21101579 ~ 21102271 (+) | True | G779964 |
| TU892294 | other | downstream | 2588977 | 23044007 ~ 23047045 (+) | False | G783405 |
| TU892315 | other | downstream | 2650441 | 23105471 ~ 23108039 (+) | True | gba3 |
| TU893055 | other | downstream | 3310675 | 23765705 ~ 23779501 (+) | True | LOC110531760 |
| TU893030 | other | downstream | 3347556 | 23802586 ~ 23804137 (+) | True | LOC110531761 |
