RNA id: trnag-ucc-27



Basic Information


Item Value
RNA id trnag-ucc-27
length 72
RNA type mRNA
GC content 0.54
exon number 1
gene id trnag-ucc-27
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33068678 ~ 33068749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU905379 lncRNA upstream 2404 33063086 ~ 33066274 (+) True trnag-ucc-19
TU905381 lncRNA upstream 4850 33061638 ~ 33063828 (+) False trnag-ucc-19
TU905375 lncRNA upstream 7558 33032239 ~ 33061120 (+) True trnag-ucc-3
TU905384 lncRNA upstream 19243 33046280 ~ 33049435 (+) True trnag-ucc-10
TU905376 lncRNA upstream 36497 33029550 ~ 33032181 (+) False trnag-ucc-19
TU905391 lncRNA downstream 37500 33106249 ~ 33106723 (+) True G795437
TU905392 lncRNA downstream 47458 33116207 ~ 33123231 (+) False G795438
TU905393 lncRNA downstream 47458 33116207 ~ 33123231 (+) False G795438
TU905394 lncRNA downstream 47458 33116207 ~ 33123231 (+) True G795438
TU905398 lncRNA downstream 74632 33143381 ~ 33143673 (+) True G795442
trnag-ucc-26 mRNA upstream 1198 33067409 ~ 33067480 (+) True trnag-ucc-26
trnag-ucc-25 mRNA upstream 1703 33066904 ~ 33066975 (+) True trnag-ucc-25
trnag-ucc-24 mRNA upstream 2208 33066399 ~ 33066470 (+) True trnag-ucc-24
trnag-ucc-23 mRNA upstream 2713 33065894 ~ 33065965 (+) True trnag-ucc-23
trnag-ucc-22 mRNA upstream 3218 33065389 ~ 33065460 (+) True trnag-ucc-22
trnag-ucc-28 mRNA downstream 1340 33070089 ~ 33070160 (+) True trnag-ucc-28
trnag-ucc-29 mRNA downstream 2751 33071500 ~ 33071571 (+) True trnag-ucc-29
trnag-ucc-30 mRNA downstream 4162 33072911 ~ 33072982 (+) True trnag-ucc-30
trnag-ucc-31 mRNA downstream 5573 33074322 ~ 33074393 (+) True trnag-ucc-31
trnag-ucc-32 mRNA downstream 6985 33075734 ~ 33075805 (+) True trnag-ucc-32
TU904694 other upstream 481290 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 565929 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 566323 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 943942 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 1052673 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1487182 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2296239 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3244380 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3965669 37034418 ~ 37035918 (+) True G799578