RNA id: trnag-ucc-66


Basic Information

Item Value
RNA id trnag-ucc-66
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-66
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33149844 ~ 33149915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU905398 lncRNA upstream 6171 33143381 ~ 33143673 (+) True G795442
TU905392 lncRNA upstream 26613 33116207 ~ 33123231 (+) False G795438
TU905393 lncRNA upstream 26613 33116207 ~ 33123231 (+) False G795438
TU905394 lncRNA upstream 26613 33116207 ~ 33123231 (+) True G795438
TU905391 lncRNA upstream 43121 33106249 ~ 33106723 (+) True G795437
TU905402 lncRNA downstream 38433 33188348 ~ 33215920 (+) False G795445
TU905403 lncRNA downstream 38433 33188348 ~ 33233498 (+) True G795445
TU905405 lncRNA downstream 81160 33231075 ~ 33232779 (+) True G795447
TU905447 lncRNA downstream 101106 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 172288 33322203 ~ 33322608 (+) True G795560
trnag-ucc-65 mRNA upstream 2595 33147178 ~ 33147249 (+) True trnag-ucc-65
trnag-ucc-64 mRNA upstream 5261 33144512 ~ 33144583 (+) True trnag-ucc-64
trnag-ucc-63 mRNA upstream 6672 33143101 ~ 33143172 (+) True trnag-ucc-63
trnag-ucc-62 mRNA upstream 8081 33141692 ~ 33141763 (+) True trnag-ucc-62
trnag-ucc-61 mRNA upstream 9348 33140425 ~ 33140496 (+) True trnag-ucc-61
trnag-ucc-67 mRNA downstream 1196 33151111 ~ 33151182 (+) True trnag-ucc-67
trnag-ucc-68 mRNA downstream 2605 33152520 ~ 33152591 (+) True trnag-ucc-68
trnag-ucc-69 mRNA downstream 3874 33153789 ~ 33153860 (+) True trnag-ucc-69
trnag-ucc-70 mRNA downstream 5143 33155058 ~ 33155129 (+) True trnag-ucc-70
trnag-ucc-71 mRNA downstream 6552 33156467 ~ 33156538 (+) True trnag-ucc-71
TU904694 other upstream 562456 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 647095 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 647489 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1025108 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 971507 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1406016 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2215073 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3163214 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3884503 37034418 ~ 37035918 (+) True G799578