RNA id: trnag-ucc-73


Basic Information

Item Value
RNA id trnag-ucc-73
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-73
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33159006 ~ 33159077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU905398 lncRNA upstream 15333 33143381 ~ 33143673 (+) True G795442
TU905392 lncRNA upstream 35775 33116207 ~ 33123231 (+) False G795438
TU905393 lncRNA upstream 35775 33116207 ~ 33123231 (+) False G795438
TU905394 lncRNA upstream 35775 33116207 ~ 33123231 (+) True G795438
TU905391 lncRNA upstream 52283 33106249 ~ 33106723 (+) True G795437
TU905402 lncRNA downstream 29271 33188348 ~ 33215920 (+) False G795445
TU905403 lncRNA downstream 29271 33188348 ~ 33233498 (+) True G795445
TU905405 lncRNA downstream 71998 33231075 ~ 33232779 (+) True G795447
TU905447 lncRNA downstream 91944 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 163126 33322203 ~ 33322608 (+) True G795560
trnag-ucc-72 mRNA upstream 1198 33157737 ~ 33157808 (+) True trnag-ucc-72
trnag-ucc-71 mRNA upstream 2468 33156467 ~ 33156538 (+) True trnag-ucc-71
trnag-ucc-70 mRNA upstream 3877 33155058 ~ 33155129 (+) True trnag-ucc-70
trnag-ucc-69 mRNA upstream 5146 33153789 ~ 33153860 (+) True trnag-ucc-69
trnag-ucc-68 mRNA upstream 6415 33152520 ~ 33152591 (+) True trnag-ucc-68
trnag-ucc-74 mRNA downstream 1199 33160276 ~ 33160347 (+) True trnag-ucc-74
trnag-ucc-75 mRNA downstream 2468 33161545 ~ 33161616 (+) True trnag-ucc-75
trnag-ucc-76 mRNA downstream 3738 33162815 ~ 33162886 (+) True trnag-ucc-76
trnag-ucc-77 mRNA downstream 5007 33164084 ~ 33164155 (+) True trnag-ucc-77
trnag-ucc-78 mRNA downstream 6277 33165354 ~ 33165425 (+) True trnag-ucc-78
TU904694 other upstream 571618 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 656257 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 656651 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1034270 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 962345 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1396854 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2205911 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3154052 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3875341 37034418 ~ 37035918 (+) True G799578