RNA id: trnag-ucc-92


Basic Information

Item Value
RNA id trnag-ucc-92
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-92
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33186499 ~ 33186570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU905398 lncRNA upstream 42826 33143381 ~ 33143673 (+) True G795442
TU905392 lncRNA upstream 63268 33116207 ~ 33123231 (+) False G795438
TU905393 lncRNA upstream 63268 33116207 ~ 33123231 (+) False G795438
TU905394 lncRNA upstream 63268 33116207 ~ 33123231 (+) True G795438
TU905391 lncRNA upstream 79776 33106249 ~ 33106723 (+) True G795437
TU905402 lncRNA downstream 1778 33188348 ~ 33215920 (+) False G795445
TU905403 lncRNA downstream 1778 33188348 ~ 33233498 (+) True G795445
TU905405 lncRNA downstream 44505 33231075 ~ 33232779 (+) True G795447
TU905447 lncRNA downstream 64451 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 135633 33322203 ~ 33322608 (+) True G795560
trnag-ucc-91 mRNA upstream 1198 33185230 ~ 33185301 (+) True trnag-ucc-91
trnag-ucc-90 mRNA upstream 2467 33183961 ~ 33184032 (+) True trnag-ucc-90
trnag-ucc-89 mRNA upstream 5287 33181141 ~ 33181212 (+) True trnag-ucc-89
trnag-ucc-88 mRNA upstream 6696 33179732 ~ 33179803 (+) True trnag-ucc-88
trnag-ucc-87 mRNA upstream 7965 33178463 ~ 33178534 (+) True trnag-ucc-87
trnag-ucc-93 mRNA downstream 1198 33187768 ~ 33187839 (+) True trnag-ucc-93
trnag-ucc-94 mRNA downstream 1964 33188534 ~ 33188605 (+) True trnag-ucc-94
trnag-ucc-95 mRNA downstream 3233 33189803 ~ 33189874 (+) True trnag-ucc-95
trnag-ucc-96 mRNA downstream 4502 33191072 ~ 33191143 (+) True trnag-ucc-96
trnag-ucc-97 mRNA downstream 5771 33192341 ~ 33192412 (+) True trnag-ucc-97
TU904694 other upstream 599111 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 683750 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 684144 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1061763 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 934852 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1369361 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2178418 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3126559 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3847848 37034418 ~ 37035918 (+) True G799578