RNA id: trnag-ucc-96


Basic Information

Item Value
RNA id trnag-ucc-96
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-96
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33191072 ~ 33191143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU905398 lncRNA upstream 47399 33143381 ~ 33143673 (+) True G795442
TU905392 lncRNA upstream 67841 33116207 ~ 33123231 (+) False G795438
TU905393 lncRNA upstream 67841 33116207 ~ 33123231 (+) False G795438
TU905394 lncRNA upstream 67841 33116207 ~ 33123231 (+) True G795438
TU905391 lncRNA upstream 84349 33106249 ~ 33106723 (+) True G795437
TU905405 lncRNA downstream 39932 33231075 ~ 33232779 (+) True G795447
TU905447 lncRNA downstream 59878 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 131060 33322203 ~ 33322608 (+) True G795560
TU905547 lncRNA downstream 132208 33323351 ~ 33323846 (+) True G795564
TU905551 lncRNA downstream 136972 33328115 ~ 33328354 (+) True G795568
trnag-ucc-95 mRNA upstream 1198 33189803 ~ 33189874 (+) True trnag-ucc-95
trnag-ucc-94 mRNA upstream 2467 33188534 ~ 33188605 (+) True trnag-ucc-94
trnag-ucc-93 mRNA upstream 3233 33187768 ~ 33187839 (+) True trnag-ucc-93
trnag-ucc-92 mRNA upstream 4502 33186499 ~ 33186570 (+) True trnag-ucc-92
trnag-ucc-91 mRNA upstream 5771 33185230 ~ 33185301 (+) True trnag-ucc-91
trnag-ucc-97 mRNA downstream 1198 33192341 ~ 33192412 (+) True trnag-ucc-97
trnag-ucc-98 mRNA downstream 2467 33193610 ~ 33193681 (+) True trnag-ucc-98
trnag-ucc-99 mRNA downstream 3736 33194879 ~ 33194950 (+) True trnag-ucc-99
trnag-ucc-100 mRNA downstream 5005 33196148 ~ 33196219 (+) True trnag-ucc-100
trnag-ucc-101 mRNA downstream 6272 33197415 ~ 33197486 (+) True trnag-ucc-101
TU904694 other upstream 603684 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 688323 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 688717 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1066336 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 930279 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1364788 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2173845 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3121986 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3843275 37034418 ~ 37035918 (+) True G799578