RNA id: trnag-ucc-126



Basic Information


Item Value
RNA id trnag-ucc-126
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-126
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33232991 ~ 33233062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU905405 lncRNA upstream 212 33231075 ~ 33232779 (+) True G795447
TU905402 lncRNA upstream 17071 33188348 ~ 33215920 (+) False G795445
TU905398 lncRNA upstream 89318 33143381 ~ 33143673 (+) True G795442
TU905392 lncRNA upstream 109760 33116207 ~ 33123231 (+) False G795438
TU905447 lncRNA downstream 17959 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 89141 33322203 ~ 33322608 (+) True G795560
TU905547 lncRNA downstream 90289 33323351 ~ 33323846 (+) True G795564
TU905551 lncRNA downstream 95053 33328115 ~ 33328354 (+) True G795568
TU905613 lncRNA downstream 158270 33391332 ~ 33391805 (+) True G795617
trnag-ucc-125 mRNA upstream 575 33232345 ~ 33232416 (+) True trnag-ucc-125
trnag-ucc-124 mRNA upstream 1984 33230936 ~ 33231007 (+) True trnag-ucc-124
trnag-ucc-123 mRNA upstream 3309 33229611 ~ 33229682 (+) True trnag-ucc-123
trnag-ucc-122 mRNA upstream 4634 33228286 ~ 33228357 (+) True trnag-ucc-122
trnag-ucc-121 mRNA upstream 6043 33226877 ~ 33226948 (+) True trnag-ucc-121
trnag-ucc-127 mRNA downstream 1338 33234400 ~ 33234471 (+) True trnag-ucc-127
trnag-ucc-128 mRNA downstream 2746 33235808 ~ 33235879 (+) True trnag-ucc-128
trnag-ucc-129 mRNA downstream 4154 33237216 ~ 33237287 (+) True trnag-ucc-129
trnag-ucc-130 mRNA downstream 5562 33238624 ~ 33238695 (+) True trnag-ucc-130
trnag-ucc-131 mRNA downstream 6970 33240032 ~ 33240103 (+) True trnag-ucc-131
TU904694 other upstream 645603 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 730242 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 730636 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1108255 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 888360 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1322869 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2131926 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3080067 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3801356 37034418 ~ 37035918 (+) True G799578