RNA id: trnag-ucc-134



Basic Information


Item Value
RNA id trnag-ucc-134
length 72
RNA type mRNA
GC content 0.56
exon number 1
gene id trnag-ucc-134
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33244256 ~ 33244327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcattggtggtatagtggtgagcattgctgccttccaagcagttcacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU905403 lncRNA upstream 10758 33188348 ~ 33233498 (+) True G795445
TU905405 lncRNA upstream 11477 33231075 ~ 33232779 (+) True G795447
TU905402 lncRNA upstream 28336 33188348 ~ 33215920 (+) False G795445
TU905398 lncRNA upstream 100583 33143381 ~ 33143673 (+) True G795442
TU905393 lncRNA upstream 121025 33116207 ~ 33123231 (+) False G795438
TU905447 lncRNA downstream 6694 33251021 ~ 33316895 (+) True G795477
TU905541 lncRNA downstream 77876 33322203 ~ 33322608 (+) True G795560
TU905547 lncRNA downstream 79024 33323351 ~ 33323846 (+) True G795564
TU905551 lncRNA downstream 83788 33328115 ~ 33328354 (+) True G795568
TU905613 lncRNA downstream 147005 33391332 ~ 33391805 (+) True G795617
trnag-ucc-133 mRNA upstream 1337 33242848 ~ 33242919 (+) True trnag-ucc-133
trnag-ucc-132 mRNA upstream 2745 33241440 ~ 33241511 (+) True trnag-ucc-132
trnag-ucc-131 mRNA upstream 4153 33240032 ~ 33240103 (+) True trnag-ucc-131
trnag-ucc-130 mRNA upstream 5561 33238624 ~ 33238695 (+) True trnag-ucc-130
trnag-ucc-129 mRNA upstream 6969 33237216 ~ 33237287 (+) True trnag-ucc-129
trnag-ucc-135 mRNA downstream 1337 33245664 ~ 33245735 (+) True trnag-ucc-135
trnag-ucc-136 mRNA downstream 2745 33247072 ~ 33247143 (+) True trnag-ucc-136
trnag-ucc-137 mRNA downstream 5561 33249888 ~ 33249959 (+) True trnag-ucc-137
trnag-ucc-138 mRNA downstream 6969 33251296 ~ 33251367 (+) True trnag-ucc-138
XM_021615469.2 mRNA downstream 116935 33361262 ~ 33387966 (+) False LOC110531943
TU904694 other upstream 656868 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 741507 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 741901 32501847 ~ 32502355 (+) True G794892
TU904136 other upstream 1119520 32122682 ~ 32124736 (+) False zgc:112271
TU906563 other downstream 877095 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1311604 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2120661 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3068802 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 3790091 37034418 ~ 37035918 (+) True G799578