RNA id: trnap-agg-146


Basic Information

Item Value
RNA id trnap-agg-146
length 72
RNA type mRNA
GC content 0.60
exon number 1
gene id trnap-agg-146
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36605261 ~ 36605332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU909661 lncRNA upstream 19946 36563392 ~ 36585315 (+) True G799221
TU909659 lncRNA upstream 66762 36538298 ~ 36538499 (+) True G799219
TU909658 lncRNA upstream 68779 36536238 ~ 36536482 (+) True G799218
TU909656 lncRNA upstream 81597 36523384 ~ 36523664 (+) True G799216
TU909654 lncRNA upstream 110209 36476096 ~ 36495052 (+) True G799214
TU909664 lncRNA downstream 5535 36610867 ~ 36622475 (+) True trnap-agg-149
TU909681 lncRNA downstream 25959 36631291 ~ 36631528 (+) True G799239
TU909687 lncRNA downstream 34498 36639830 ~ 36640639 (+) True G799245
TU909691 lncRNA downstream 39978 36645310 ~ 36645631 (+) True G799249
TU909692 lncRNA downstream 40352 36645684 ~ 36646031 (+) True G799250
trnap-agg-145 mRNA upstream 1331 36603859 ~ 36603930 (+) True trnap-agg-145
trnap-agg-144 mRNA upstream 2733 36602457 ~ 36602528 (+) True trnap-agg-144
trnap-agg-143 mRNA upstream 4135 36601055 ~ 36601126 (+) True trnap-agg-143
trnap-agg-142 mRNA upstream 5537 36599653 ~ 36599724 (+) True trnap-agg-142
trnap-agg-141 mRNA upstream 6937 36598253 ~ 36598324 (+) True trnap-agg-141
trnap-agg-147 mRNA downstream 2733 36608065 ~ 36608136 (+) True trnap-agg-147
trnap-agg-148 mRNA downstream 4135 36609467 ~ 36609538 (+) True trnap-agg-148
trnap-agg-149 mRNA downstream 5537 36610869 ~ 36610940 (+) False trnap-agg-149
trnap-agg-150 mRNA downstream 6940 36612272 ~ 36612343 (+) True trnap-agg-150
XR_002474793.2 mRNA downstream 329729 36935061 ~ 36937214 (+) True LOC110531983
TU909468 other upstream 288456 36313129 ~ 36316805 (+) True G799053
TU908119 other upstream 1233113 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 2048639 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 2483521 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 4017873 32583606 ~ 32587388 (+) True G794886
TU910049 other downstream 429086 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 961913 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 1464884 38070216 ~ 38071433 (+) False G800834
TU912414 other downstream 2182729 38788061 ~ 38788354 (+) True G801778
TU912489 other downstream 2327620 38932952 ~ 38933868 (+) True G801851