RNA id: XM_021615635.2


Basic Information

Item Value
RNA id XM_021615635.2
length 4245
RNA type mRNA
GC content 0.54
exon number 14
gene id map3k12
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39730948 ~ 39747079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGCACTGGGAAGGAGACAGCTCCCTCCCCCAACCCAGCGCGCGACTCACGTTCCATGGTTCCCCGGTTATTGATAACACAATTTGCCCGCTGGGATTCGTTCTGATAACGTGAACTCGTGGAAAGGGACTTTCACGCAATAAAACGACTGTAAGTCCGGAGAGGAAAAACGACAATTGTTCTTAATTATCGCATGTAGCAAGCTGAACCCATCCCGTACTTGACAACGCGACATCAACGAGGCAGAAAGgcctccccttctccctctgtactCCCATCCATCCTTggctactgtgttgtgggacccCCTGATGAGTGGGACCTGCCTCCATGAGCCCCgcgccccctccccctctctctcaggctTCAGCACCCCCATCTCAGAGCCCCCCTTCCGCAGGTTGGATGCCGACACCCCTGCCTGCACCCCCGAGACCGACCTGACCCCCACCCAGTGTGTCCTCCGCAACGTGTTGTCCATCGACACCGGTGGGGCACCAGGGGTGCCAGGCGGGGTTGAGGGGTGCCCCCACACCTGCGGCAGCAGCCCCACCCCTAGCGACGGGCTCCCGGCCCACTTTGACAACAGTGTGCTGAAGTTACACGAGCATGAGGCTTGCCAGTGTGGGGGCGGGGCAGAGGCAGGGCTTAGCTCGGAGGCTGGGGCCGTCCGTAGCCAATCAGACAACATCCGGATGCAGCAAGGAGGTGGAGGGTTTCTGGAGGGGCTGTTTGGCTGCCTGAAACCCGTCTGGACCATGATCGGGAAAGCATACTCCCCCGAACACAAGCATAACCAGGAAGGTGTGTGGAAATCCTGGGAGGTTCCGTTTGAAGAGATCTCGGACCTGCAATGGGTTGGCAGCGGGGCCCAGGGGGCGGTCTTCTTGGGGAAGTTCCACGGAGAGGATGTGGCCGTCAAGAAAGTCCGGGACATCAAGGAGACGGAGATCAAGCACCTACGCAAACTCAAGCACCCCAACATCATCACCTTCAAGGGTATCTGCACCCAGGCTCCCTGCTACTGTATCCTGATGGAGTACTGTGCCCAGGGCCAGCTGTACGAGGTGCTGAGAGCAGGCAGGAAGATTACCCCCTCCCTGCTCATTGACTGGGCCATGGGCATCGCCGGGGGCATGAACTACCTGCACCTCCACAAGATCATCCACAGAGACCTCAAGTCCCCCAATATGCTGATTACCCATGATGACCTAGTGAAGATCTCTGACTTCGGCACCTCCAAGGAGCTCATTGATAAGAGCATGAAGATGTCCTTCGCTGGTACGGTGGCCTGGATGGCCCCAGAGGTCATTCGGAATGAACCCGTATCGGAGAAGGTAGACATCTGGTCGTTCGGGGTGGTGCTGTGGGAGATGCTGACCGGGGAGGTCCCCTATAAGGATGTGGACTCCTCTGCCATCATCTGGGGGGTGGGCAACAACAGCCTGAACCTCCCTATCCCCGAGAGCTGCCCAGACGGCTTCAAAATCCTCCTGAGGCAGTGCTGGAACTGTAAACCCAGAAATAGACCCTCTTTCCGTCAGATCCTTCTCCATCTGGATATAGCCTCAGCTGATGTACTCTCCACCCCACAGGAGACATACTTCAAGTCTCAGGCTGAGTGGCGGGAGGAGGTGAAGCAGCACTTTGAGAAGATTAAGTCTGAGGGGACCTGTCTGCACCGACTGGACGAGGAACTGATCAACCGGCGCAGAGAGGAGCTCAGGCACGCTCTGGACATCCGGGAGCACTATGAGAGGAAGCTGGAGAGGACCAACAACCTCTACATGGAGCTCAACGCTGTCATGCTGCAGCTGGAGCTCAAAGAGAAAGAGCTGCAGAAGAGAGAGCAGTCTTTAGATAAGAAGTATCCAGGACTGTTCAAGCACCACAGCTCCAGACAGACTAGCTCCTCCAACTCCATGGACAAACTCATCAAGAAGAGAAATGTCCCACAGAAACTGCCCTCTGGAAAGAGGCCAGACATCCTCAAGTCAGAGGTGATCATTCCCAAGATGGATTCCTCTGTGATGCAGGTCACTATCCCCTCCTGCTCCAACAGGGGCTCCACGTCTCCTAGCCGCTCGCGTAGGGTCAAGACCCGCCACCGCAAGCCTGGCAAGGGCAGCAGCGGGGACCTTGCCGGCCTGAAGGCCACTCAACCCTCTCCCGACGGGGAAAACCCTGCCCAGGCCAACAGCTCCAGCACGGGCCCCTCCAAGCAGCTCCAGGAACCCAGCGTGGCCCTGCGGGCCCTGGGCCACGAGCAGCAGCAGAGGCAGCTGTCCTCCTCCAGCCCGGACCTCATCTGCACCACACTGGCGGCTGAGGGTCAAGGGAAAGCAGAACCTACCGTTGGGGGGCTTGAGAGGGGCGGCAGCCTGAGCGCCTCCGCGGGCCTAGGGGGGTCCGAGGGGGGCGCAGGGGGTCTGGATGACCTCACAGAGACCACCCCACGCAGCGACACGCCCAGTGAGGACGCAGCCTCGTTCCCCTTCTCTAGCAGCCCAGACTCGCCATGTGGAAGGGGGGTGGCCGCCGGGAGGGGGTCTGTGCTGGGCGGCCCACGCCTGCCCCACGATGGGGACGATAAGGAAGAGGGAGTGAGTGGTATGAGGTTACCCCGGGGGGCATCAGGCCATCTCACTCCCTCAGCTATCCTGTACAGGGCGGCCATCGCACGCAAACAGAGGCGTGGCGTGtcttcagaggaggaggagggggaggttgaCAGCGAGGTGGAGTTGCCACGGAGACGACGTCCGACCAGCATCACCAAGTGCCAGTTGGTGTCTACCTTCAGCTCGGAGAACCTCTCTGTGTCGGATGGCGAAGAGGGCCACACCACCGACCACTCCCACAGTGGCACGCCGGACGTCGTCAGCACCAACACGGACGACCGTCTGGGCGACCGTAGCGATGACCTCCTGTCGCAGGGGTCAGAGATCCCAGCAGACAACACTGACCCGGTGCAGGCCTCTGGCGGGCTGTCTGAGAGGGAGGGAGCCCTGGGCCAGGTCAAAGCCCTGCTGGACGCTTCACAGAATCCTAATGAGaGTCGGGCCCTGTGCGACGACTCGGACTGCGACAGCGCTGAGCTCGACCAGTCAGGAAGCGGGGAGCCCAGTCGTCCACCCAGCGCTGGGGCCTGGGCACCTCCATCAGGGTACCCCTCTGGGCCCCAACAAGGGTCTCCTCAGGGGCACCAGACAGGGCCTCCATAGAGCCAACACACTGGACACTATAGAACGACAGCTACCTTACAGTAAACAACCATCACAGAGCCTACCTACGCCAGTATCTAAAACAGGACTTCACTCAATGTGATGAGTGGTCACATCAACTGAGCTCAGGCTATGACAAGTTAACGACCAGTGTCTCGTGCAGCAATATGGGTTTGTTAGTTAGCATATCTTCATAAAATAAACACAGGTGATTTGTTATAAACTGACAGCAGTTGTTAGGACAGCTTGTGATATGACTTGTTTAGATTTCATTTTATAGAGAGTTTAGATCAAGTGTTAATACAGGAACCTTTAGACACTGCTCCagttcagcaaaaaaaaaaaacttgcacACCGACAAAACAGACATGCGCACACACTGTCCCCTTGCCAACTGGTACTTTACCATCACAGCTCTTGGAGGAGCCTAATGTCCAATTCACAAATTTCTCCCATGCAAATGAATAATGTAGATATTCACATATCACGTtacaaaaaataatatattttacaTGTAAGATAACTGATGTAGAAAACAAATAAAGCAGTATGCAGCCCAATTAACAAATGCATGACTACACGTTTATATTAAGTTTTGGATGTGTCCGTTTTATATTTTGTGAGAAGGTTTACACTTTTTTTACCCTGAAAGTATTCATTTCCATAAGAATTTTTGTTAATGAATTGAGGTTGGCACTTAAAAAAGGTTATATCAAAAGGTGAATGAACAGCTCAGTAAAATGTTTGAACCTTCGACAGGTCCCTCAGCTGGTAATGTTAAAGTCATACTTTTATCTTAACTCTCCTACCACAGAGTTTTGAATACACAACCCTTTAAGATCACAGAGAAACTAGCCAGAACAAAGATAGAATACTGCTCTCTGGTGGTAGTAGTGGAATAGTAAGTATCCTTTGAATTTCAAGaggtttttgtttttaatacagcATTGCACATTGTACTGTAACATAGGAATTATATCAAAATATGAGCAAGAAAATAAATACTGTATTGGTAAATCTTC

Function

GO: NA

KEGG:

id description
K04423 MAP3K12, MUK; mitogen-activated protein kinase kinase kinase 12

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU913519 lncRNA upstream 14278 39716433 ~ 39716670 (+) True G802778
TU913503 lncRNA upstream 55599 39675013 ~ 39675349 (+) True G802764
TU913111 lncRNA upstream 168217 39558265 ~ 39562731 (+) True G802399
TU913103 lncRNA upstream 174283 39554187 ~ 39556665 (+) True G802392
TU913040 lncRNA upstream 227379 39502500 ~ 39503569 (+) True LOC110532032
TU913552 lncRNA downstream 28388 39775467 ~ 39775699 (+) True G802811
TU913561 lncRNA downstream 40817 39787896 ~ 39788238 (+) True G802820
TU913580 lncRNA downstream 67096 39814175 ~ 39817115 (+) True G802831
TU913625 lncRNA downstream 134115 39881194 ~ 39894131 (+) True G802875
TU913652 lncRNA downstream 170060 39917139 ~ 39949106 (+) True G802900
XM_021615630.2 mRNA upstream 15062 39685828 ~ 39715886 (+) False LOC110532038
XM_021615631.2 mRNA upstream 15062 39685828 ~ 39715886 (+) True LOC110532038
XM_021615634.2 mRNA upstream 90059 39639241 ~ 39640889 (+) False spryd4
XM_021615624.2 mRNA upstream 188282 39531582 ~ 39542666 (+) False g6pd
XM_021615647.2 mRNA downstream 102672 39849751 ~ 39855939 (+) False stac3
XR_005053243.1 mRNA downstream 102672 39849751 ~ 39855939 (+) False stac3
XM_036987962.1 mRNA downstream 102694 39849773 ~ 39855939 (+) True stac3
XM_036987963.1 mRNA downstream 118804 39865883 ~ 39873666 (+) True LOC110531167
XM_021615650.2 mRNA downstream 192686 39939765 ~ 39946085 (+) True LOC110532052
TU913483 other upstream 90079 39639254 ~ 39640869 (+) True spryd4
TU913038 other upstream 257391 39465973 ~ 39473557 (+) True adcy6a
TU913022 other upstream 313488 39415875 ~ 39417460 (+) False G802324
TU913562 other downstream 42578 39789657 ~ 39790402 (+) True G802821
TU913563 other downstream 44838 39791917 ~ 39792333 (+) True G802822
TU913576 other downstream 63248 39810327 ~ 39812025 (+) False G802830
TU913578 other downstream 63248 39810327 ~ 39812025 (+) True G802830
TU914248 other downstream 639686 40386765 ~ 40389052 (+) True LOC110532068

Expression Profile