Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001165093.2 |
| length | 1002 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | taf10 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 43285841 ~ 43287979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006352 | DNA-templated transcription, initiation | biological_process |
| GO:0006413 | translational initiation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003743 | translation initiation factor activity | molecular_function |
| id | description |
|---|---|
| K03134 | TAF10; transcription initiation factor TFIID subunit 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU917615 | lncRNA | upstream | 45512 | 43240263 ~ 43240623 (+) | True | G806407 |
| TU917614 | lncRNA | upstream | 46311 | 43239616 ~ 43239824 (+) | True | G806406 |
| TU917613 | lncRNA | upstream | 47216 | 43238702 ~ 43238919 (+) | True | G806405 |
| TU917612 | lncRNA | upstream | 47449 | 43237853 ~ 43238686 (+) | True | G806404 |
| TU917611 | lncRNA | upstream | 49619 | 43233156 ~ 43236516 (+) | True | G806403 |
| TU917670 | lncRNA | downstream | 32082 | 43320051 ~ 43322678 (+) | True | G806458 |
| TU917682 | lncRNA | downstream | 75695 | 43363664 ~ 43364473 (+) | True | G806470 |
| TU917726 | lncRNA | downstream | 147691 | 43435660 ~ 43435872 (+) | True | G806510 |
| TU917729 | lncRNA | downstream | 153189 | 43441158 ~ 43441383 (+) | True | G806513 |
| TU918125 | lncRNA | downstream | 200908 | 43488877 ~ 43489132 (+) | True | G806884 |
| XM_021614416.2 | mRNA | upstream | 11129 | 43265517 ~ 43275006 (+) | True | LOC110531181 |
| XM_036988062.1 | mRNA | upstream | 323107 | 42935264 ~ 42963028 (+) | False | LOC110532149 |
| XM_021615792.2 | mRNA | upstream | 323107 | 42941350 ~ 42963028 (+) | False | LOC110532149 |
| XM_021615793.2 | mRNA | upstream | 323107 | 42941350 ~ 42963028 (+) | True | LOC110532149 |
| XM_021615791.2 | mRNA | upstream | 355145 | 42912383 ~ 42930990 (+) | True | LOC110532148 |
| XM_021615812.2 | mRNA | downstream | 180 | 43288149 ~ 43323809 (+) | False | ppih |
| XM_021615814.2 | mRNA | downstream | 187 | 43288156 ~ 43323809 (+) | False | ppih |
| XM_021615815.2 | mRNA | downstream | 236 | 43288205 ~ 43323809 (+) | False | ppih |
| XM_036988067.1 | mRNA | downstream | 13030 | 43300999 ~ 43323809 (+) | False | ppih |
| XM_021615813.2 | mRNA | downstream | 23196 | 43311165 ~ 43323806 (+) | True | ppih |
| TU916660 | other | upstream | 937349 | 42346176 ~ 42348786 (+) | True | G805600 |
| TU916494 | other | upstream | 953697 | 42332093 ~ 42332438 (+) | True | G805451 |
| TU916102 | other | upstream | 1261732 | 42021859 ~ 42024403 (+) | True | LOC110532114 |
| TU914750 | other | upstream | 1850712 | 41434884 ~ 41435423 (+) | False | LOC110532096 |
| TU914604 | other | upstream | 2264633 | 41020936 ~ 41021502 (+) | True | G803728 |
| TU919016 | other | downstream | 907746 | 44195715 ~ 44196041 (+) | True | G807677 |
| TU919191 | other | downstream | 1154693 | 44442662 ~ 44453077 (+) | True | G807841 |
| TU921250 | other | downstream | 2846762 | 46134731 ~ 46135732 (+) | True | G809685 |
| TU923963 | other | downstream | 4694032 | 47982001 ~ 47982301 (+) | True | G812143 |
| TU924562 | other | downstream | 5257485 | 48545454 ~ 48570593 (+) | True | G812688 |
